Gene : Cagra.0114s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12953:SF1 - GALACTOSE-BINDING PROTEIN Genomic Order:  16
Name:  ? Cagra.0114s0016 Secondary Identifier:  ? PAC:28915818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0016 0.5kb upstream 0.5kb upstream 3393 true Scaffold114: 53335-56727 Capsella grandiflora
Cagra.0114s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 56228-56727 Capsella grandiflora
Cagra.0114s0016 0.5kb downstream 0.5kb downstream 3393 true Scaffold114: 52835-56227 Capsella grandiflora
Cagra.0114s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 52835-53334 Capsella grandiflora
Cagra.0114s0016 1.0kb upstream 1.0kb upstream 3893 true Scaffold114: 53335-57227 Capsella grandiflora
Cagra.0114s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 56228-57227 Capsella grandiflora
Cagra.0114s0016 1.0kb downstream 1.0kb downstream 3893 true Scaffold114: 52335-56227 Capsella grandiflora
Cagra.0114s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 52335-53334 Capsella grandiflora
Cagra.0114s0016 2.0kb upstream 2.0kb upstream 4893 true Scaffold114: 53335-58227 Capsella grandiflora
Cagra.0114s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 56228-58227 Capsella grandiflora
Cagra.0114s0016 2.0kb downstream 2.0kb downstream 4893 true Scaffold114: 51335-56227 Capsella grandiflora
Cagra.0114s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 51335-53334 Capsella grandiflora
Cagra.0114s0016 5.0kb upstream 5.0kb upstream 7893 true Scaffold114: 53335-61227 Capsella grandiflora
Cagra.0114s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 56228-61227 Capsella grandiflora
Cagra.0114s0016 5.0kb downstream 5.0kb downstream 7893 true Scaffold114: 48335-56227 Capsella grandiflora
Cagra.0114s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 48335-53334 Capsella grandiflora
Cagra.0114s0016 10.0kb upstream 10.0kb upstream 12893 true Scaffold114: 53335-66227 Capsella grandiflora
Cagra.0114s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 56228-66227 Capsella grandiflora
Cagra.0114s0016 10.0kb downstream 10.0kb downstream 12893 true Scaffold114: 43335-56227 Capsella grandiflora
Cagra.0114s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 43335-53334 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372603 5261 Brassicaceae View MSA
123836519 5264 Brassicales-Malvales View MSA
124339256 5266 SBM View MSA
124236857 5268 Malvidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain