Gene : Cagra.0114s0026 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  26
Name:  ? Cagra.0114s0026 Secondary Identifier:  ? PAC:28915745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0026 0.5kb upstream 0.5kb upstream 1930 true Scaffold114: 86328-88257 Capsella grandiflora
Cagra.0114s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 87758-88257 Capsella grandiflora
Cagra.0114s0026 0.5kb downstream 0.5kb downstream 1930 true Scaffold114: 85828-87757 Capsella grandiflora
Cagra.0114s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 85828-86327 Capsella grandiflora
Cagra.0114s0026 1.0kb upstream 1.0kb upstream 2430 true Scaffold114: 86328-88757 Capsella grandiflora
Cagra.0114s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 87758-88757 Capsella grandiflora
Cagra.0114s0026 1.0kb downstream 1.0kb downstream 2430 true Scaffold114: 85328-87757 Capsella grandiflora
Cagra.0114s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 85328-86327 Capsella grandiflora
Cagra.0114s0026 2.0kb upstream 2.0kb upstream 3430 true Scaffold114: 86328-89757 Capsella grandiflora
Cagra.0114s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 87758-89757 Capsella grandiflora
Cagra.0114s0026 2.0kb downstream 2.0kb downstream 3430 true Scaffold114: 84328-87757 Capsella grandiflora
Cagra.0114s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 84328-86327 Capsella grandiflora
Cagra.0114s0026 5.0kb upstream 5.0kb upstream 6430 true Scaffold114: 86328-92757 Capsella grandiflora
Cagra.0114s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 87758-92757 Capsella grandiflora
Cagra.0114s0026 5.0kb downstream 5.0kb downstream 6430 true Scaffold114: 81328-87757 Capsella grandiflora
Cagra.0114s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 81328-86327 Capsella grandiflora
Cagra.0114s0026 10.0kb upstream 10.0kb upstream 11430 true Scaffold114: 86328-97757 Capsella grandiflora
Cagra.0114s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 87758-97757 Capsella grandiflora
Cagra.0114s0026 10.0kb downstream 10.0kb downstream 11430 true Scaffold114: 76328-87757 Capsella grandiflora
Cagra.0114s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 76328-86327 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376535 5261 Brassicaceae View MSA
123841157 5264 Brassicales-Malvales View MSA
124344283 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain