Gene : Cagra.0114s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR36319:SF1 - PROTEIN GIGANTEA Genomic Order:  27
Name:  ? Cagra.0114s0027 Secondary Identifier:  ? PAC:28915812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0027 0.5kb upstream 0.5kb upstream 6894 true Scaffold114: 88048-94941 Capsella grandiflora
Cagra.0114s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 94442-94941 Capsella grandiflora
Cagra.0114s0027 0.5kb downstream 0.5kb downstream 6894 true Scaffold114: 87548-94441 Capsella grandiflora
Cagra.0114s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 87548-88047 Capsella grandiflora
Cagra.0114s0027 1.0kb upstream 1.0kb upstream 7394 true Scaffold114: 88048-95441 Capsella grandiflora
Cagra.0114s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 94442-95441 Capsella grandiflora
Cagra.0114s0027 1.0kb downstream 1.0kb downstream 7394 true Scaffold114: 87048-94441 Capsella grandiflora
Cagra.0114s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 87048-88047 Capsella grandiflora
Cagra.0114s0027 2.0kb upstream 2.0kb upstream 8394 true Scaffold114: 88048-96441 Capsella grandiflora
Cagra.0114s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 94442-96441 Capsella grandiflora
Cagra.0114s0027 2.0kb downstream 2.0kb downstream 8394 true Scaffold114: 86048-94441 Capsella grandiflora
Cagra.0114s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 86048-88047 Capsella grandiflora
Cagra.0114s0027 5.0kb upstream 5.0kb upstream 11394 true Scaffold114: 88048-99441 Capsella grandiflora
Cagra.0114s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 94442-99441 Capsella grandiflora
Cagra.0114s0027 5.0kb downstream 5.0kb downstream 11394 true Scaffold114: 83048-94441 Capsella grandiflora
Cagra.0114s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 83048-88047 Capsella grandiflora
Cagra.0114s0027 10.0kb upstream 10.0kb upstream 16394 true Scaffold114: 88048-104441 Capsella grandiflora
Cagra.0114s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 94442-104441 Capsella grandiflora
Cagra.0114s0027 10.0kb downstream 10.0kb downstream 16394 true Scaffold114: 78048-94441 Capsella grandiflora
Cagra.0114s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 78048-88047 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364911 5261 Brassicaceae View MSA
123829698 5264 Brassicales-Malvales View MSA
124337179 5266 SBM View MSA
124241531 5268 Malvidae View MSA
124064536 5270 Rosid View MSA
123738488 5271 Pentapetalae View MSA
122787616 5272 Eudicot View MSA
122046361 5273 Angiosperm View MSA
121310594 5274 Embryophyte View MSA
123348039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain