Gene : Cagra.0096s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN Genomic Order:  30
Name:  ? Cagra.0096s0030 Secondary Identifier:  ? PAC:28896975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0030 0.5kb upstream 0.5kb upstream 4063 true Scaffold96: 141125-145187 Capsella grandiflora
Cagra.0096s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 144688-145187 Capsella grandiflora
Cagra.0096s0030 0.5kb downstream 0.5kb downstream 4063 true Scaffold96: 140625-144687 Capsella grandiflora
Cagra.0096s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 140625-141124 Capsella grandiflora
Cagra.0096s0030 1.0kb upstream 1.0kb upstream 4563 true Scaffold96: 141125-145687 Capsella grandiflora
Cagra.0096s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 144688-145687 Capsella grandiflora
Cagra.0096s0030 1.0kb downstream 1.0kb downstream 4563 true Scaffold96: 140125-144687 Capsella grandiflora
Cagra.0096s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 140125-141124 Capsella grandiflora
Cagra.0096s0030 2.0kb upstream 2.0kb upstream 5563 true Scaffold96: 141125-146687 Capsella grandiflora
Cagra.0096s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 144688-146687 Capsella grandiflora
Cagra.0096s0030 2.0kb downstream 2.0kb downstream 5563 true Scaffold96: 139125-144687 Capsella grandiflora
Cagra.0096s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 139125-141124 Capsella grandiflora
Cagra.0096s0030 5.0kb upstream 5.0kb upstream 8563 true Scaffold96: 141125-149687 Capsella grandiflora
Cagra.0096s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 144688-149687 Capsella grandiflora
Cagra.0096s0030 5.0kb downstream 5.0kb downstream 8563 true Scaffold96: 136125-144687 Capsella grandiflora
Cagra.0096s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 136125-141124 Capsella grandiflora
Cagra.0096s0030 10.0kb upstream 10.0kb upstream 13563 true Scaffold96: 141125-154687 Capsella grandiflora
Cagra.0096s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 144688-154687 Capsella grandiflora
Cagra.0096s0030 10.0kb downstream 10.0kb downstream 13563 true Scaffold96: 131125-144687 Capsella grandiflora
Cagra.0096s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 131125-141124 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363307 5261 Brassicaceae View MSA
123835477 5264 Brassicales-Malvales View MSA
124338308 5266 SBM View MSA
124248802 5268 Malvidae View MSA
124063136 5270 Rosid View MSA
123741665 5271 Pentapetalae View MSA
122789476 5272 Eudicot View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain