Gene : Cagra.0096s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11649:SF56 - TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL Genomic Order:  34
Name:  ? Cagra.0096s0034 Secondary Identifier:  ? PAC:28896993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0034 0.5kb upstream 0.5kb upstream 3195 true Scaffold96: 165701-168895 Capsella grandiflora
Cagra.0096s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 168396-168895 Capsella grandiflora
Cagra.0096s0034 0.5kb downstream 0.5kb downstream 3195 true Scaffold96: 165201-168395 Capsella grandiflora
Cagra.0096s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 165201-165700 Capsella grandiflora
Cagra.0096s0034 1.0kb upstream 1.0kb upstream 3695 true Scaffold96: 165701-169395 Capsella grandiflora
Cagra.0096s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 168396-169395 Capsella grandiflora
Cagra.0096s0034 1.0kb downstream 1.0kb downstream 3695 true Scaffold96: 164701-168395 Capsella grandiflora
Cagra.0096s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 164701-165700 Capsella grandiflora
Cagra.0096s0034 2.0kb upstream 2.0kb upstream 4695 true Scaffold96: 165701-170395 Capsella grandiflora
Cagra.0096s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 168396-170395 Capsella grandiflora
Cagra.0096s0034 2.0kb downstream 2.0kb downstream 4695 true Scaffold96: 163701-168395 Capsella grandiflora
Cagra.0096s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 163701-165700 Capsella grandiflora
Cagra.0096s0034 5.0kb upstream 5.0kb upstream 7695 true Scaffold96: 165701-173395 Capsella grandiflora
Cagra.0096s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 168396-173395 Capsella grandiflora
Cagra.0096s0034 5.0kb downstream 5.0kb downstream 7695 true Scaffold96: 160701-168395 Capsella grandiflora
Cagra.0096s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 160701-165700 Capsella grandiflora
Cagra.0096s0034 10.0kb upstream 10.0kb upstream 12695 true Scaffold96: 165701-178395 Capsella grandiflora
Cagra.0096s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 168396-178395 Capsella grandiflora
Cagra.0096s0034 10.0kb downstream 10.0kb downstream 12695 true Scaffold96: 155701-168395 Capsella grandiflora
Cagra.0096s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 155701-165700 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366049 5261 Brassicaceae View MSA
123834682 5264 Brassicales-Malvales View MSA
124344028 5266 SBM View MSA
124242361 5268 Malvidae View MSA
124062172 5270 Rosid View MSA
123739565 5271 Pentapetalae View MSA
122791860 5272 Eudicot View MSA
122042865 5273 Angiosperm View MSA
121344741 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain