Gene : Cagra.0096s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11449 - RIBOSOMAL PROTEIN L30 Genomic Order:  40
Name:  ? Cagra.0096s0040 Secondary Identifier:  ? PAC:28896985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0040 0.5kb upstream 0.5kb upstream 1847 true Scaffold96: 197653-199499 Capsella grandiflora
Cagra.0096s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 197653-198152 Capsella grandiflora
Cagra.0096s0040 0.5kb downstream 0.5kb downstream 1847 true Scaffold96: 198153-199999 Capsella grandiflora
Cagra.0096s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 199500-199999 Capsella grandiflora
Cagra.0096s0040 1.0kb upstream 1.0kb upstream 2347 true Scaffold96: 197153-199499 Capsella grandiflora
Cagra.0096s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 197153-198152 Capsella grandiflora
Cagra.0096s0040 1.0kb downstream 1.0kb downstream 2347 true Scaffold96: 198153-200499 Capsella grandiflora
Cagra.0096s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 199500-200499 Capsella grandiflora
Cagra.0096s0040 2.0kb upstream 2.0kb upstream 3347 true Scaffold96: 196153-199499 Capsella grandiflora
Cagra.0096s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 196153-198152 Capsella grandiflora
Cagra.0096s0040 2.0kb downstream 2.0kb downstream 3347 true Scaffold96: 198153-201499 Capsella grandiflora
Cagra.0096s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 199500-201499 Capsella grandiflora
Cagra.0096s0040 5.0kb upstream 5.0kb upstream 6347 true Scaffold96: 193153-199499 Capsella grandiflora
Cagra.0096s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 193153-198152 Capsella grandiflora
Cagra.0096s0040 5.0kb downstream 5.0kb downstream 6347 true Scaffold96: 198153-204499 Capsella grandiflora
Cagra.0096s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 199500-204499 Capsella grandiflora
Cagra.0096s0040 10.0kb upstream 10.0kb upstream 11347 true Scaffold96: 188153-199499 Capsella grandiflora
Cagra.0096s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 188153-198152 Capsella grandiflora
Cagra.0096s0040 10.0kb downstream 10.0kb downstream 11347 true Scaffold96: 198153-209499 Capsella grandiflora
Cagra.0096s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 199500-209499 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375988 5261 Brassicaceae View MSA
123801104 5264 Brassicales-Malvales View MSA
124346762 5266 SBM View MSA
124244091 5268 Malvidae View MSA
124064182 5270 Rosid View MSA
123750614 5271 Pentapetalae View MSA
122788206 5272 Eudicot View MSA
122051684 5273 Angiosperm View MSA
121344063 5274 Embryophyte View MSA
123425041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain