Gene : Cagra.0096s0055 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32227:SF130 - GLYCOSYL HYDROLASE FAMILY 17 PROTEIN-RELATED Genomic Order:  55
Name:  ? Cagra.0096s0055 Secondary Identifier:  ? PAC:28897036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0055 0.5kb upstream 0.5kb upstream 1729 true Scaffold96: 261482-263210 Capsella grandiflora
Cagra.0096s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 261482-261981 Capsella grandiflora
Cagra.0096s0055 0.5kb downstream 0.5kb downstream 1729 true Scaffold96: 261982-263710 Capsella grandiflora
Cagra.0096s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 263211-263710 Capsella grandiflora
Cagra.0096s0055 1.0kb upstream 1.0kb upstream 2229 true Scaffold96: 260982-263210 Capsella grandiflora
Cagra.0096s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 260982-261981 Capsella grandiflora
Cagra.0096s0055 1.0kb downstream 1.0kb downstream 2229 true Scaffold96: 261982-264210 Capsella grandiflora
Cagra.0096s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 263211-264210 Capsella grandiflora
Cagra.0096s0055 2.0kb upstream 2.0kb upstream 3229 true Scaffold96: 259982-263210 Capsella grandiflora
Cagra.0096s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 259982-261981 Capsella grandiflora
Cagra.0096s0055 2.0kb downstream 2.0kb downstream 3229 true Scaffold96: 261982-265210 Capsella grandiflora
Cagra.0096s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 263211-265210 Capsella grandiflora
Cagra.0096s0055 5.0kb upstream 5.0kb upstream 6229 true Scaffold96: 256982-263210 Capsella grandiflora
Cagra.0096s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 256982-261981 Capsella grandiflora
Cagra.0096s0055 5.0kb downstream 5.0kb downstream 6229 true Scaffold96: 261982-268210 Capsella grandiflora
Cagra.0096s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 263211-268210 Capsella grandiflora
Cagra.0096s0055 10.0kb upstream 10.0kb upstream 11229 true Scaffold96: 251982-263210 Capsella grandiflora
Cagra.0096s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 251982-261981 Capsella grandiflora
Cagra.0096s0055 10.0kb downstream 10.0kb downstream 11229 true Scaffold96: 261982-273210 Capsella grandiflora
Cagra.0096s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 263211-273210 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376038 5261 Brassicaceae View MSA
123830532 5264 Brassicales-Malvales View MSA
124350691 5266 SBM View MSA
124248032 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain