Gene : Cagra.0086s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12780 - RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED Genomic Order:  35
Name:  ? Cagra.0086s0035 Secondary Identifier:  ? PAC:28918427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0086s0035 0.5kb upstream 0.5kb upstream 1496 true Scaffold86: 125998-127493 Capsella grandiflora
Cagra.0086s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold86: 125998-126497 Capsella grandiflora
Cagra.0086s0035 0.5kb downstream 0.5kb downstream 1496 true Scaffold86: 126498-127993 Capsella grandiflora
Cagra.0086s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold86: 127494-127993 Capsella grandiflora
Cagra.0086s0035 1.0kb upstream 1.0kb upstream 1996 true Scaffold86: 125498-127493 Capsella grandiflora
Cagra.0086s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold86: 125498-126497 Capsella grandiflora
Cagra.0086s0035 1.0kb downstream 1.0kb downstream 1996 true Scaffold86: 126498-128493 Capsella grandiflora
Cagra.0086s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold86: 127494-128493 Capsella grandiflora
Cagra.0086s0035 2.0kb upstream 2.0kb upstream 2996 true Scaffold86: 124498-127493 Capsella grandiflora
Cagra.0086s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold86: 124498-126497 Capsella grandiflora
Cagra.0086s0035 2.0kb downstream 2.0kb downstream 2996 true Scaffold86: 126498-129493 Capsella grandiflora
Cagra.0086s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold86: 127494-129493 Capsella grandiflora
Cagra.0086s0035 5.0kb upstream 5.0kb upstream 5996 true Scaffold86: 121498-127493 Capsella grandiflora
Cagra.0086s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold86: 121498-126497 Capsella grandiflora
Cagra.0086s0035 5.0kb downstream 5.0kb downstream 5996 true Scaffold86: 126498-132493 Capsella grandiflora
Cagra.0086s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold86: 127494-132493 Capsella grandiflora
Cagra.0086s0035 10.0kb upstream 10.0kb upstream 10996 true Scaffold86: 116498-127493 Capsella grandiflora
Cagra.0086s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold86: 116498-126497 Capsella grandiflora
Cagra.0086s0035 10.0kb downstream 10.0kb downstream 10996 true Scaffold86: 126498-137493 Capsella grandiflora
Cagra.0086s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold86: 127494-137493 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363016 5261 Brassicaceae View MSA
123833239 5264 Brassicales-Malvales View MSA
124340164 5266 SBM View MSA
124245053 5268 Malvidae View MSA
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain