Gene : Cagra.0086s0051 C. grandiflora v1.1
Defline:  (1 of 4) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  51
Name:  ? Cagra.0086s0051 Secondary Identifier:  ? PAC:28918475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0086s0051 0.5kb upstream 0.5kb upstream 2938 true Scaffold86: 193717-196654 Capsella grandiflora
Cagra.0086s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold86: 193717-194216 Capsella grandiflora
Cagra.0086s0051 0.5kb downstream 0.5kb downstream 2938 true Scaffold86: 194217-197154 Capsella grandiflora
Cagra.0086s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold86: 196655-197154 Capsella grandiflora
Cagra.0086s0051 1.0kb upstream 1.0kb upstream 3438 true Scaffold86: 193217-196654 Capsella grandiflora
Cagra.0086s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold86: 193217-194216 Capsella grandiflora
Cagra.0086s0051 1.0kb downstream 1.0kb downstream 3438 true Scaffold86: 194217-197654 Capsella grandiflora
Cagra.0086s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold86: 196655-197654 Capsella grandiflora
Cagra.0086s0051 2.0kb upstream 2.0kb upstream 4438 true Scaffold86: 192217-196654 Capsella grandiflora
Cagra.0086s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold86: 192217-194216 Capsella grandiflora
Cagra.0086s0051 2.0kb downstream 2.0kb downstream 4438 true Scaffold86: 194217-198654 Capsella grandiflora
Cagra.0086s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold86: 196655-198654 Capsella grandiflora
Cagra.0086s0051 5.0kb upstream 5.0kb upstream 7438 true Scaffold86: 189217-196654 Capsella grandiflora
Cagra.0086s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold86: 189217-194216 Capsella grandiflora
Cagra.0086s0051 5.0kb downstream 5.0kb downstream 7438 true Scaffold86: 194217-201654 Capsella grandiflora
Cagra.0086s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold86: 196655-201654 Capsella grandiflora
Cagra.0086s0051 10.0kb upstream 10.0kb upstream 12438 true Scaffold86: 184217-196654 Capsella grandiflora
Cagra.0086s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold86: 184217-194216 Capsella grandiflora
Cagra.0086s0051 10.0kb downstream 10.0kb downstream 12438 true Scaffold86: 194217-206654 Capsella grandiflora
Cagra.0086s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold86: 196655-206654 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122362733 5261 Brassicaceae View MSA
123834108 5264 Brassicales-Malvales View MSA
124340985 5266 SBM View MSA
124242304 5268 Malvidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain