Gene : Cagra.0086s0063 C. grandiflora v1.1
Defline:  (1 of 5) PF04842 - Plant protein of unknown function (DUF639) (DUF639) Genomic Order:  63
Name:  ? Cagra.0086s0063 Secondary Identifier:  ? PAC:28918440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0086s0063 0.5kb upstream 0.5kb upstream 4382 true Scaffold86: 247234-251615 Capsella grandiflora
Cagra.0086s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold86: 247234-247733 Capsella grandiflora
Cagra.0086s0063 0.5kb downstream 0.5kb downstream 4382 true Scaffold86: 247734-252115 Capsella grandiflora
Cagra.0086s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold86: 251616-252115 Capsella grandiflora
Cagra.0086s0063 1.0kb upstream 1.0kb upstream 4882 true Scaffold86: 246734-251615 Capsella grandiflora
Cagra.0086s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold86: 246734-247733 Capsella grandiflora
Cagra.0086s0063 1.0kb downstream 1.0kb downstream 4882 true Scaffold86: 247734-252615 Capsella grandiflora
Cagra.0086s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold86: 251616-252615 Capsella grandiflora
Cagra.0086s0063 2.0kb upstream 2.0kb upstream 5882 true Scaffold86: 245734-251615 Capsella grandiflora
Cagra.0086s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold86: 245734-247733 Capsella grandiflora
Cagra.0086s0063 2.0kb downstream 2.0kb downstream 5882 true Scaffold86: 247734-253615 Capsella grandiflora
Cagra.0086s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold86: 251616-253615 Capsella grandiflora
Cagra.0086s0063 5.0kb upstream 5.0kb upstream 8882 true Scaffold86: 242734-251615 Capsella grandiflora
Cagra.0086s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold86: 242734-247733 Capsella grandiflora
Cagra.0086s0063 5.0kb downstream 5.0kb downstream 8882 true Scaffold86: 247734-256615 Capsella grandiflora
Cagra.0086s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold86: 251616-256615 Capsella grandiflora
Cagra.0086s0063 10.0kb upstream 10.0kb upstream 13882 true Scaffold86: 237734-251615 Capsella grandiflora
Cagra.0086s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold86: 237734-247733 Capsella grandiflora
Cagra.0086s0063 10.0kb downstream 10.0kb downstream 9296 true Scaffold86: 247734-257029 Capsella grandiflora
Cagra.0086s0063 10.0kb downstream 10.0kb downstream 5414 false Scaffold86: 251616-257029 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363462 5261 Brassicaceae View MSA
123831816 5264 Brassicales-Malvales View MSA
124341071 5266 SBM View MSA
124236835 5268 Malvidae View MSA
124063835 5270 Rosid View MSA
123748748 5271 Pentapetalae View MSA
122793299 5272 Eudicot View MSA
122044116 5273 Angiosperm View MSA
121343828 5274 Embryophyte View MSA
123379926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain