Gene : Cagra.0090s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15852:SF20 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  16
Name:  ? Cagra.0090s0016 Secondary Identifier:  ? PAC:28902660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0090s0016 0.5kb upstream 0.5kb upstream 3022 true Scaffold90: 54793-57814 Capsella grandiflora
Cagra.0090s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold90: 57315-57814 Capsella grandiflora
Cagra.0090s0016 0.5kb downstream 0.5kb downstream 3022 true Scaffold90: 54293-57314 Capsella grandiflora
Cagra.0090s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold90: 54293-54792 Capsella grandiflora
Cagra.0090s0016 1.0kb upstream 1.0kb upstream 3522 true Scaffold90: 54793-58314 Capsella grandiflora
Cagra.0090s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold90: 57315-58314 Capsella grandiflora
Cagra.0090s0016 1.0kb downstream 1.0kb downstream 3522 true Scaffold90: 53793-57314 Capsella grandiflora
Cagra.0090s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold90: 53793-54792 Capsella grandiflora
Cagra.0090s0016 2.0kb upstream 2.0kb upstream 4522 true Scaffold90: 54793-59314 Capsella grandiflora
Cagra.0090s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold90: 57315-59314 Capsella grandiflora
Cagra.0090s0016 2.0kb downstream 2.0kb downstream 4522 true Scaffold90: 52793-57314 Capsella grandiflora
Cagra.0090s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold90: 52793-54792 Capsella grandiflora
Cagra.0090s0016 5.0kb upstream 5.0kb upstream 7522 true Scaffold90: 54793-62314 Capsella grandiflora
Cagra.0090s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold90: 57315-62314 Capsella grandiflora
Cagra.0090s0016 5.0kb downstream 5.0kb downstream 7522 true Scaffold90: 49793-57314 Capsella grandiflora
Cagra.0090s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold90: 49793-54792 Capsella grandiflora
Cagra.0090s0016 10.0kb upstream 10.0kb upstream 12522 true Scaffold90: 54793-67314 Capsella grandiflora
Cagra.0090s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold90: 57315-67314 Capsella grandiflora
Cagra.0090s0016 10.0kb downstream 10.0kb downstream 12522 true Scaffold90: 44793-57314 Capsella grandiflora
Cagra.0090s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold90: 44793-54792 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373613 5261 Brassicaceae View MSA
123832662 5264 Brassicales-Malvales View MSA
124345451 5266 SBM View MSA
124242869 5268 Malvidae View MSA
124067925 5270 Rosid View MSA
123738521 5271 Pentapetalae View MSA
122790446 5272 Eudicot View MSA
122044241 5273 Angiosperm View MSA
121346623 5274 Embryophyte View MSA
123380417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain