Gene : Cagra.0094s0009 C. grandiflora v1.1
Defline:  (1 of 1) 1.1.1.14 - L-iditol 2-dehydrogenase / Sorbitol dehydrogenase Genomic Order:  9
Name:  ? Cagra.0094s0009 Secondary Identifier:  ? PAC:28912382
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4101 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0094s0009 0.5kb upstream 0.5kb upstream 2564 true Scaffold94: 21771-24334 Capsella grandiflora
Cagra.0094s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold94: 21771-22270 Capsella grandiflora
Cagra.0094s0009 0.5kb downstream 0.5kb downstream 2564 true Scaffold94: 22271-24834 Capsella grandiflora
Cagra.0094s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold94: 24335-24834 Capsella grandiflora
Cagra.0094s0009 1.0kb upstream 1.0kb upstream 3064 true Scaffold94: 21271-24334 Capsella grandiflora
Cagra.0094s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold94: 21271-22270 Capsella grandiflora
Cagra.0094s0009 1.0kb downstream 1.0kb downstream 3064 true Scaffold94: 22271-25334 Capsella grandiflora
Cagra.0094s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold94: 24335-25334 Capsella grandiflora
Cagra.0094s0009 2.0kb upstream 2.0kb upstream 4064 true Scaffold94: 20271-24334 Capsella grandiflora
Cagra.0094s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold94: 20271-22270 Capsella grandiflora
Cagra.0094s0009 2.0kb downstream 2.0kb downstream 4064 true Scaffold94: 22271-26334 Capsella grandiflora
Cagra.0094s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold94: 24335-26334 Capsella grandiflora
Cagra.0094s0009 5.0kb upstream 5.0kb upstream 7064 true Scaffold94: 17271-24334 Capsella grandiflora
Cagra.0094s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold94: 17271-22270 Capsella grandiflora
Cagra.0094s0009 5.0kb downstream 5.0kb downstream 7064 true Scaffold94: 22271-29334 Capsella grandiflora
Cagra.0094s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold94: 24335-29334 Capsella grandiflora
Cagra.0094s0009 10.0kb upstream 10.0kb upstream 12064 true Scaffold94: 12271-24334 Capsella grandiflora
Cagra.0094s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold94: 12271-22270 Capsella grandiflora
Cagra.0094s0009 10.0kb downstream 10.0kb downstream 12064 true Scaffold94: 22271-34334 Capsella grandiflora
Cagra.0094s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold94: 24335-34334 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361923 5261 Brassicaceae View MSA
123827813 5264 Brassicales-Malvales View MSA
124321486 5266 SBM View MSA
124239815 5268 Malvidae View MSA
124062823 5270 Rosid View MSA
123737718 5271 Pentapetalae View MSA
122797678 5272 Eudicot View MSA
122049435 5273 Angiosperm View MSA
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain