Gene : Cagra.0301s0107 C. grandiflora v1.1
Defline:  (1 of 2) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  107
Name:  ? Cagra.0301s0107 Secondary Identifier:  ? PAC:28907875
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0107 0.5kb upstream 0.5kb upstream 3445 true Scaffold301: 408536-411980 Capsella grandiflora
Cagra.0301s0107 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 411481-411980 Capsella grandiflora
Cagra.0301s0107 0.5kb downstream 0.5kb downstream 3445 true Scaffold301: 408036-411480 Capsella grandiflora
Cagra.0301s0107 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 408036-408535 Capsella grandiflora
Cagra.0301s0107 1.0kb upstream 1.0kb upstream 3945 true Scaffold301: 408536-412480 Capsella grandiflora
Cagra.0301s0107 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 411481-412480 Capsella grandiflora
Cagra.0301s0107 1.0kb downstream 1.0kb downstream 3945 true Scaffold301: 407536-411480 Capsella grandiflora
Cagra.0301s0107 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 407536-408535 Capsella grandiflora
Cagra.0301s0107 2.0kb upstream 2.0kb upstream 4945 true Scaffold301: 408536-413480 Capsella grandiflora
Cagra.0301s0107 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 411481-413480 Capsella grandiflora
Cagra.0301s0107 2.0kb downstream 2.0kb downstream 4945 true Scaffold301: 406536-411480 Capsella grandiflora
Cagra.0301s0107 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 406536-408535 Capsella grandiflora
Cagra.0301s0107 5.0kb upstream 5.0kb upstream 7945 true Scaffold301: 408536-416480 Capsella grandiflora
Cagra.0301s0107 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 411481-416480 Capsella grandiflora
Cagra.0301s0107 5.0kb downstream 5.0kb downstream 7945 true Scaffold301: 403536-411480 Capsella grandiflora
Cagra.0301s0107 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 403536-408535 Capsella grandiflora
Cagra.0301s0107 10.0kb upstream 10.0kb upstream 12945 true Scaffold301: 408536-421480 Capsella grandiflora
Cagra.0301s0107 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 411481-421480 Capsella grandiflora
Cagra.0301s0107 10.0kb downstream 10.0kb downstream 12945 true Scaffold301: 398536-411480 Capsella grandiflora
Cagra.0301s0107 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 398536-408535 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363696 5261 Brassicaceae View MSA
123827535 5264 Brassicales-Malvales View MSA
124346287 5266 SBM View MSA
124237580 5268 Malvidae View MSA
124072580 5270 Rosid View MSA
123738961 5271 Pentapetalae View MSA
122769939 5272 Eudicot View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain