Gene : Cagra.0312s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10783:SF46 - EXS (ERD1/XPR1/SYG1) DOMAIN PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0312s0001 Secondary Identifier:  ? PAC:28907750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0312s0001 0.5kb upstream 0.5kb upstream 3311 true Scaffold312: 3528-6838 Capsella grandiflora
Cagra.0312s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold312: 3528-4027 Capsella grandiflora
Cagra.0312s0001 0.5kb downstream 0.5kb downstream 2841 true Scaffold312: 4028-6868 Capsella grandiflora
Cagra.0312s0001 0.5kb downstream 0.5kb downstream 30 false Scaffold312: 6839-6868 Capsella grandiflora
Cagra.0312s0001 1.0kb upstream 1.0kb upstream 3811 true Scaffold312: 3028-6838 Capsella grandiflora
Cagra.0312s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold312: 3028-4027 Capsella grandiflora
Cagra.0312s0001 1.0kb downstream 1.0kb downstream 2841 true Scaffold312: 4028-6868 Capsella grandiflora
Cagra.0312s0001 1.0kb downstream 1.0kb downstream 30 false Scaffold312: 6839-6868 Capsella grandiflora
Cagra.0312s0001 2.0kb upstream 2.0kb upstream 4811 true Scaffold312: 2028-6838 Capsella grandiflora
Cagra.0312s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold312: 2028-4027 Capsella grandiflora
Cagra.0312s0001 2.0kb downstream 2.0kb downstream 2841 true Scaffold312: 4028-6868 Capsella grandiflora
Cagra.0312s0001 2.0kb downstream 2.0kb downstream 30 false Scaffold312: 6839-6868 Capsella grandiflora
Cagra.0312s0001 5.0kb upstream 5.0kb upstream 6838 true Scaffold312: 1-6838 Capsella grandiflora
Cagra.0312s0001 5.0kb upstream 5.0kb upstream 4027 false Scaffold312: 1-4027 Capsella grandiflora
Cagra.0312s0001 5.0kb downstream 5.0kb downstream 2841 true Scaffold312: 4028-6868 Capsella grandiflora
Cagra.0312s0001 5.0kb downstream 5.0kb downstream 30 false Scaffold312: 6839-6868 Capsella grandiflora
Cagra.0312s0001 10.0kb upstream 10.0kb upstream 6838 true Scaffold312: 1-6838 Capsella grandiflora
Cagra.0312s0001 10.0kb upstream 10.0kb upstream 4027 false Scaffold312: 1-4027 Capsella grandiflora
Cagra.0312s0001 10.0kb downstream 10.0kb downstream 2841 true Scaffold312: 4028-6868 Capsella grandiflora
Cagra.0312s0001 10.0kb downstream 10.0kb downstream 30 false Scaffold312: 6839-6868 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333486 5261 Brassicaceae Singleton cluster - no MSA
123841945 5264 Brassicales-Malvales View MSA
124351273 5266 SBM View MSA
124242002 5268 Malvidae View MSA
124063910 5270 Rosid View MSA
123749394 5271 Pentapetalae View MSA
122792287 5272 Eudicot View MSA
122045610 5273 Angiosperm View MSA
121348290 5274 Embryophyte View MSA
123424613 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain