Gene : Cagra.0316s0018 C. grandiflora v1.1
Defline:  (1 of 1) 2.7.1.130 - Tetraacyldisaccharide 4'-kinase / Lipid-A 4'-kinase Genomic Order:  18
Name:  ? Cagra.0316s0018 Secondary Identifier:  ? PAC:28915666
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora NAGLIPASYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0018 0.5kb upstream 0.5kb upstream 2486 true Scaffold316: 66462-68947 Capsella grandiflora
Cagra.0316s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 66462-66961 Capsella grandiflora
Cagra.0316s0018 0.5kb downstream 0.5kb downstream 2486 true Scaffold316: 66962-69447 Capsella grandiflora
Cagra.0316s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 68948-69447 Capsella grandiflora
Cagra.0316s0018 1.0kb upstream 1.0kb upstream 2986 true Scaffold316: 65962-68947 Capsella grandiflora
Cagra.0316s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 65962-66961 Capsella grandiflora
Cagra.0316s0018 1.0kb downstream 1.0kb downstream 2986 true Scaffold316: 66962-69947 Capsella grandiflora
Cagra.0316s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 68948-69947 Capsella grandiflora
Cagra.0316s0018 2.0kb upstream 2.0kb upstream 3986 true Scaffold316: 64962-68947 Capsella grandiflora
Cagra.0316s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 64962-66961 Capsella grandiflora
Cagra.0316s0018 2.0kb downstream 2.0kb downstream 3986 true Scaffold316: 66962-70947 Capsella grandiflora
Cagra.0316s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 68948-70947 Capsella grandiflora
Cagra.0316s0018 5.0kb upstream 5.0kb upstream 6986 true Scaffold316: 61962-68947 Capsella grandiflora
Cagra.0316s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 61962-66961 Capsella grandiflora
Cagra.0316s0018 5.0kb downstream 5.0kb downstream 6986 true Scaffold316: 66962-73947 Capsella grandiflora
Cagra.0316s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 68948-73947 Capsella grandiflora
Cagra.0316s0018 10.0kb upstream 10.0kb upstream 11986 true Scaffold316: 56962-68947 Capsella grandiflora
Cagra.0316s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 56962-66961 Capsella grandiflora
Cagra.0316s0018 10.0kb downstream 10.0kb downstream 11986 true Scaffold316: 66962-78947 Capsella grandiflora
Cagra.0316s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 68948-78947 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040908 5273 Angiosperm View MSA
122374202 5261 Brassicaceae View MSA
123828332 5264 Brassicales-Malvales View MSA
124342280 5266 SBM View MSA
124241124 5268 Malvidae View MSA
124066187 5270 Rosid View MSA
123740901 5271 Pentapetalae View MSA
122791289 5272 Eudicot View MSA
121346697 5274 Embryophyte View MSA
123380430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain