Gene : Cagra.0316s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  16
Name:  ? Cagra.0316s0016 Secondary Identifier:  ? PAC:28915676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0016 0.5kb upstream 0.5kb upstream 1850 true Scaffold316: 58421-60270 Capsella grandiflora
Cagra.0316s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 59771-60270 Capsella grandiflora
Cagra.0316s0016 0.5kb downstream 0.5kb downstream 1850 true Scaffold316: 57921-59770 Capsella grandiflora
Cagra.0316s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 57921-58420 Capsella grandiflora
Cagra.0316s0016 1.0kb upstream 1.0kb upstream 2350 true Scaffold316: 58421-60770 Capsella grandiflora
Cagra.0316s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 59771-60770 Capsella grandiflora
Cagra.0316s0016 1.0kb downstream 1.0kb downstream 2350 true Scaffold316: 57421-59770 Capsella grandiflora
Cagra.0316s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 57421-58420 Capsella grandiflora
Cagra.0316s0016 2.0kb upstream 2.0kb upstream 3350 true Scaffold316: 58421-61770 Capsella grandiflora
Cagra.0316s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 59771-61770 Capsella grandiflora
Cagra.0316s0016 2.0kb downstream 2.0kb downstream 3350 true Scaffold316: 56421-59770 Capsella grandiflora
Cagra.0316s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 56421-58420 Capsella grandiflora
Cagra.0316s0016 5.0kb upstream 5.0kb upstream 6350 true Scaffold316: 58421-64770 Capsella grandiflora
Cagra.0316s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 59771-64770 Capsella grandiflora
Cagra.0316s0016 5.0kb downstream 5.0kb downstream 6350 true Scaffold316: 53421-59770 Capsella grandiflora
Cagra.0316s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 53421-58420 Capsella grandiflora
Cagra.0316s0016 10.0kb upstream 10.0kb upstream 11350 true Scaffold316: 58421-69770 Capsella grandiflora
Cagra.0316s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 59771-69770 Capsella grandiflora
Cagra.0316s0016 10.0kb downstream 10.0kb downstream 11350 true Scaffold316: 48421-59770 Capsella grandiflora
Cagra.0316s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 48421-58420 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367270 5261 Brassicaceae View MSA
123840061 5264 Brassicales-Malvales View MSA
124344011 5266 SBM View MSA
124242311 5268 Malvidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain