Gene : Cagra.0316s0031 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  31
Name:  ? Cagra.0316s0031 Secondary Identifier:  ? PAC:28915636
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-162 Capsella grandiflora pathologic  
Cgrandiflora PWY-5686 Capsella grandiflora pathologic  
Cgrandiflora PWY-7211 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0031 0.5kb upstream 0.5kb upstream 2673 true Scaffold316: 128145-130817 Capsella grandiflora
Cagra.0316s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 128145-128644 Capsella grandiflora
Cagra.0316s0031 0.5kb downstream 0.5kb downstream 2673 true Scaffold316: 128645-131317 Capsella grandiflora
Cagra.0316s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 130818-131317 Capsella grandiflora
Cagra.0316s0031 1.0kb upstream 1.0kb upstream 3173 true Scaffold316: 127645-130817 Capsella grandiflora
Cagra.0316s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 127645-128644 Capsella grandiflora
Cagra.0316s0031 1.0kb downstream 1.0kb downstream 3173 true Scaffold316: 128645-131817 Capsella grandiflora
Cagra.0316s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 130818-131817 Capsella grandiflora
Cagra.0316s0031 2.0kb upstream 2.0kb upstream 4173 true Scaffold316: 126645-130817 Capsella grandiflora
Cagra.0316s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 126645-128644 Capsella grandiflora
Cagra.0316s0031 2.0kb downstream 2.0kb downstream 4173 true Scaffold316: 128645-132817 Capsella grandiflora
Cagra.0316s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 130818-132817 Capsella grandiflora
Cagra.0316s0031 5.0kb upstream 5.0kb upstream 7173 true Scaffold316: 123645-130817 Capsella grandiflora
Cagra.0316s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 123645-128644 Capsella grandiflora
Cagra.0316s0031 5.0kb downstream 5.0kb downstream 7173 true Scaffold316: 128645-135817 Capsella grandiflora
Cagra.0316s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 130818-135817 Capsella grandiflora
Cagra.0316s0031 10.0kb upstream 10.0kb upstream 12173 true Scaffold316: 118645-130817 Capsella grandiflora
Cagra.0316s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 118645-128644 Capsella grandiflora
Cagra.0316s0031 10.0kb downstream 10.0kb downstream 12173 true Scaffold316: 128645-140817 Capsella grandiflora
Cagra.0316s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 130818-140817 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain