Gene : Cagra.0301s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21654:SF10 - GT-2-RELATED PROTEIN Genomic Order:  27
Name:  ? Cagra.0301s0027 Secondary Identifier:  ? PAC:28907893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0027 0.5kb upstream 0.5kb upstream 1798 true Scaffold301: 84886-86683 Capsella grandiflora
Cagra.0301s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 84886-85385 Capsella grandiflora
Cagra.0301s0027 0.5kb downstream 0.5kb downstream 1798 true Scaffold301: 85386-87183 Capsella grandiflora
Cagra.0301s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 86684-87183 Capsella grandiflora
Cagra.0301s0027 1.0kb upstream 1.0kb upstream 2298 true Scaffold301: 84386-86683 Capsella grandiflora
Cagra.0301s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 84386-85385 Capsella grandiflora
Cagra.0301s0027 1.0kb downstream 1.0kb downstream 2298 true Scaffold301: 85386-87683 Capsella grandiflora
Cagra.0301s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 86684-87683 Capsella grandiflora
Cagra.0301s0027 2.0kb upstream 2.0kb upstream 3298 true Scaffold301: 83386-86683 Capsella grandiflora
Cagra.0301s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 83386-85385 Capsella grandiflora
Cagra.0301s0027 2.0kb downstream 2.0kb downstream 3298 true Scaffold301: 85386-88683 Capsella grandiflora
Cagra.0301s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 86684-88683 Capsella grandiflora
Cagra.0301s0027 5.0kb upstream 5.0kb upstream 6298 true Scaffold301: 80386-86683 Capsella grandiflora
Cagra.0301s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 80386-85385 Capsella grandiflora
Cagra.0301s0027 5.0kb downstream 5.0kb downstream 6298 true Scaffold301: 85386-91683 Capsella grandiflora
Cagra.0301s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 86684-91683 Capsella grandiflora
Cagra.0301s0027 10.0kb upstream 10.0kb upstream 11298 true Scaffold301: 75386-86683 Capsella grandiflora
Cagra.0301s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 75386-85385 Capsella grandiflora
Cagra.0301s0027 10.0kb downstream 10.0kb downstream 11298 true Scaffold301: 85386-96683 Capsella grandiflora
Cagra.0301s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 86684-96683 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333467 5261 Brassicaceae Singleton cluster - no MSA
123774409 5264 Brassicales-Malvales Singleton cluster - no MSA
124272848 5266 SBM Singleton cluster - no MSA
124249636 5268 Malvidae View MSA
123952396 5270 Rosid View MSA
123744307 5271 Pentapetalae View MSA
122795013 5272 Eudicot View MSA
122048158 5273 Angiosperm View MSA
121351140 5274 Embryophyte View MSA
123382022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain