Gene : Cagra.0301s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23081:SF2 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3 Genomic Order:  28
Name:  ? Cagra.0301s0028 Secondary Identifier:  ? PAC:28907871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0028 0.5kb upstream 0.5kb upstream 6176 true Scaffold301: 87837-94012 Capsella grandiflora
Cagra.0301s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 87837-88336 Capsella grandiflora
Cagra.0301s0028 0.5kb downstream 0.5kb downstream 6176 true Scaffold301: 88337-94512 Capsella grandiflora
Cagra.0301s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 94013-94512 Capsella grandiflora
Cagra.0301s0028 1.0kb upstream 1.0kb upstream 6676 true Scaffold301: 87337-94012 Capsella grandiflora
Cagra.0301s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 87337-88336 Capsella grandiflora
Cagra.0301s0028 1.0kb downstream 1.0kb downstream 6676 true Scaffold301: 88337-95012 Capsella grandiflora
Cagra.0301s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 94013-95012 Capsella grandiflora
Cagra.0301s0028 2.0kb upstream 2.0kb upstream 7676 true Scaffold301: 86337-94012 Capsella grandiflora
Cagra.0301s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 86337-88336 Capsella grandiflora
Cagra.0301s0028 2.0kb downstream 2.0kb downstream 7676 true Scaffold301: 88337-96012 Capsella grandiflora
Cagra.0301s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 94013-96012 Capsella grandiflora
Cagra.0301s0028 5.0kb upstream 5.0kb upstream 10676 true Scaffold301: 83337-94012 Capsella grandiflora
Cagra.0301s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 83337-88336 Capsella grandiflora
Cagra.0301s0028 5.0kb downstream 5.0kb downstream 10676 true Scaffold301: 88337-99012 Capsella grandiflora
Cagra.0301s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 94013-99012 Capsella grandiflora
Cagra.0301s0028 10.0kb upstream 10.0kb upstream 15676 true Scaffold301: 78337-94012 Capsella grandiflora
Cagra.0301s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 78337-88336 Capsella grandiflora
Cagra.0301s0028 10.0kb downstream 10.0kb downstream 15676 true Scaffold301: 88337-104012 Capsella grandiflora
Cagra.0301s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 94013-104012 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373358 5261 Brassicaceae View MSA
123830154 5264 Brassicales-Malvales View MSA
124341336 5266 SBM View MSA
124237655 5268 Malvidae View MSA
124067730 5270 Rosid View MSA
123744658 5271 Pentapetalae View MSA
122790839 5272 Eudicot View MSA
122047500 5273 Angiosperm View MSA
121346684 5274 Embryophyte View MSA
123423764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain