Gene : Cagra.0301s0025 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21461:SF12 - F21O3.9 PROTEIN-RELATED Genomic Order:  25
Name:  ? Cagra.0301s0025 Secondary Identifier:  ? PAC:28907768
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0025 0.5kb upstream 0.5kb upstream 2674 true Scaffold301: 76800-79473 Capsella grandiflora
Cagra.0301s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 78974-79473 Capsella grandiflora
Cagra.0301s0025 0.5kb downstream 0.5kb downstream 2674 true Scaffold301: 76300-78973 Capsella grandiflora
Cagra.0301s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 76300-76799 Capsella grandiflora
Cagra.0301s0025 1.0kb upstream 1.0kb upstream 3174 true Scaffold301: 76800-79973 Capsella grandiflora
Cagra.0301s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 78974-79973 Capsella grandiflora
Cagra.0301s0025 1.0kb downstream 1.0kb downstream 3174 true Scaffold301: 75800-78973 Capsella grandiflora
Cagra.0301s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 75800-76799 Capsella grandiflora
Cagra.0301s0025 2.0kb upstream 2.0kb upstream 4174 true Scaffold301: 76800-80973 Capsella grandiflora
Cagra.0301s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 78974-80973 Capsella grandiflora
Cagra.0301s0025 2.0kb downstream 2.0kb downstream 4174 true Scaffold301: 74800-78973 Capsella grandiflora
Cagra.0301s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 74800-76799 Capsella grandiflora
Cagra.0301s0025 5.0kb upstream 5.0kb upstream 7174 true Scaffold301: 76800-83973 Capsella grandiflora
Cagra.0301s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 78974-83973 Capsella grandiflora
Cagra.0301s0025 5.0kb downstream 5.0kb downstream 7174 true Scaffold301: 71800-78973 Capsella grandiflora
Cagra.0301s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 71800-76799 Capsella grandiflora
Cagra.0301s0025 10.0kb upstream 10.0kb upstream 12174 true Scaffold301: 76800-88973 Capsella grandiflora
Cagra.0301s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 78974-88973 Capsella grandiflora
Cagra.0301s0025 10.0kb downstream 10.0kb downstream 12174 true Scaffold301: 66800-78973 Capsella grandiflora
Cagra.0301s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 66800-76799 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377469 5261 Brassicaceae View MSA
123837389 5264 Brassicales-Malvales View MSA
124322299 5266 SBM View MSA
124240295 5268 Malvidae View MSA
124066165 5270 Rosid View MSA
123737002 5271 Pentapetalae View MSA
122785952 5272 Eudicot View MSA
122044541 5273 Angiosperm View MSA
121348152 5274 Embryophyte View MSA
123380747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain