Gene : Cagra.0301s0050 C. grandiflora v1.1
Defline:  (1 of 3) PTHR32080:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11-RELATED Genomic Order:  50
Name:  ? Cagra.0301s0050 Secondary Identifier:  ? PAC:28907852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0050 0.5kb upstream 0.5kb upstream 3143 true Scaffold301: 175716-178858 Capsella grandiflora
Cagra.0301s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 175716-176215 Capsella grandiflora
Cagra.0301s0050 0.5kb downstream 0.5kb downstream 3143 true Scaffold301: 176216-179358 Capsella grandiflora
Cagra.0301s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 178859-179358 Capsella grandiflora
Cagra.0301s0050 1.0kb upstream 1.0kb upstream 3643 true Scaffold301: 175216-178858 Capsella grandiflora
Cagra.0301s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 175216-176215 Capsella grandiflora
Cagra.0301s0050 1.0kb downstream 1.0kb downstream 3643 true Scaffold301: 176216-179858 Capsella grandiflora
Cagra.0301s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 178859-179858 Capsella grandiflora
Cagra.0301s0050 2.0kb upstream 2.0kb upstream 4643 true Scaffold301: 174216-178858 Capsella grandiflora
Cagra.0301s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 174216-176215 Capsella grandiflora
Cagra.0301s0050 2.0kb downstream 2.0kb downstream 4643 true Scaffold301: 176216-180858 Capsella grandiflora
Cagra.0301s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 178859-180858 Capsella grandiflora
Cagra.0301s0050 5.0kb upstream 5.0kb upstream 7643 true Scaffold301: 171216-178858 Capsella grandiflora
Cagra.0301s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 171216-176215 Capsella grandiflora
Cagra.0301s0050 5.0kb downstream 5.0kb downstream 7643 true Scaffold301: 176216-183858 Capsella grandiflora
Cagra.0301s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 178859-183858 Capsella grandiflora
Cagra.0301s0050 10.0kb upstream 10.0kb upstream 12643 true Scaffold301: 166216-178858 Capsella grandiflora
Cagra.0301s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 166216-176215 Capsella grandiflora
Cagra.0301s0050 10.0kb downstream 10.0kb downstream 12643 true Scaffold301: 176216-188858 Capsella grandiflora
Cagra.0301s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 178859-188858 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040946 5273 Angiosperm View MSA
122368803 5261 Brassicaceae View MSA
123799657 5264 Brassicales-Malvales View MSA
124297154 5266 SBM View MSA
124149114 5268 Malvidae View MSA
123874985 5270 Rosid View MSA
123743595 5271 Pentapetalae View MSA
122793382 5272 Eudicot View MSA
121309775 5274 Embryophyte View MSA
123347437 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain