Gene : Cagra.0301s0088 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Genomic Order:  88
Name:  ? Cagra.0301s0088 Secondary Identifier:  ? PAC:28907853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0301s0088 0.5kb upstream 0.5kb upstream 3881 true Scaffold301: 337115-340995 Capsella grandiflora
Cagra.0301s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold301: 337115-337614 Capsella grandiflora
Cagra.0301s0088 0.5kb downstream 0.5kb downstream 3881 true Scaffold301: 337615-341495 Capsella grandiflora
Cagra.0301s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold301: 340996-341495 Capsella grandiflora
Cagra.0301s0088 1.0kb upstream 1.0kb upstream 4381 true Scaffold301: 336615-340995 Capsella grandiflora
Cagra.0301s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold301: 336615-337614 Capsella grandiflora
Cagra.0301s0088 1.0kb downstream 1.0kb downstream 4381 true Scaffold301: 337615-341995 Capsella grandiflora
Cagra.0301s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold301: 340996-341995 Capsella grandiflora
Cagra.0301s0088 2.0kb upstream 2.0kb upstream 5381 true Scaffold301: 335615-340995 Capsella grandiflora
Cagra.0301s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold301: 335615-337614 Capsella grandiflora
Cagra.0301s0088 2.0kb downstream 2.0kb downstream 5381 true Scaffold301: 337615-342995 Capsella grandiflora
Cagra.0301s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold301: 340996-342995 Capsella grandiflora
Cagra.0301s0088 5.0kb upstream 5.0kb upstream 8381 true Scaffold301: 332615-340995 Capsella grandiflora
Cagra.0301s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold301: 332615-337614 Capsella grandiflora
Cagra.0301s0088 5.0kb downstream 5.0kb downstream 8381 true Scaffold301: 337615-345995 Capsella grandiflora
Cagra.0301s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold301: 340996-345995 Capsella grandiflora
Cagra.0301s0088 10.0kb upstream 10.0kb upstream 13381 true Scaffold301: 327615-340995 Capsella grandiflora
Cagra.0301s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold301: 327615-337614 Capsella grandiflora
Cagra.0301s0088 10.0kb downstream 10.0kb downstream 13381 true Scaffold301: 337615-350995 Capsella grandiflora
Cagra.0301s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold301: 340996-350995 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362414 5261 Brassicaceae View MSA
123840275 5264 Brassicales-Malvales View MSA
124337037 5266 SBM View MSA
124252146 5268 Malvidae View MSA
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain