Gene : Cagra.0265s0002 C. grandiflora v1.1
Defline:  (1 of 29) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  2
Name:  ? Cagra.0265s0002 Secondary Identifier:  ? PAC:28897049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0265s0002 0.5kb upstream 0.5kb upstream 2041 true Scaffold265: 2176-4216 Capsella grandiflora
Cagra.0265s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold265: 2176-2675 Capsella grandiflora
Cagra.0265s0002 0.5kb downstream 0.5kb downstream 2041 true Scaffold265: 2676-4716 Capsella grandiflora
Cagra.0265s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold265: 4217-4716 Capsella grandiflora
Cagra.0265s0002 1.0kb upstream 1.0kb upstream 2541 true Scaffold265: 1676-4216 Capsella grandiflora
Cagra.0265s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold265: 1676-2675 Capsella grandiflora
Cagra.0265s0002 1.0kb downstream 1.0kb downstream 2541 true Scaffold265: 2676-5216 Capsella grandiflora
Cagra.0265s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold265: 4217-5216 Capsella grandiflora
Cagra.0265s0002 2.0kb upstream 2.0kb upstream 3541 true Scaffold265: 676-4216 Capsella grandiflora
Cagra.0265s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold265: 676-2675 Capsella grandiflora
Cagra.0265s0002 2.0kb downstream 2.0kb downstream 3541 true Scaffold265: 2676-6216 Capsella grandiflora
Cagra.0265s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold265: 4217-6216 Capsella grandiflora
Cagra.0265s0002 5.0kb upstream 5.0kb upstream 4216 true Scaffold265: 1-4216 Capsella grandiflora
Cagra.0265s0002 5.0kb upstream 5.0kb upstream 2675 false Scaffold265: 1-2675 Capsella grandiflora
Cagra.0265s0002 5.0kb downstream 5.0kb downstream 6541 true Scaffold265: 2676-9216 Capsella grandiflora
Cagra.0265s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold265: 4217-9216 Capsella grandiflora
Cagra.0265s0002 10.0kb upstream 10.0kb upstream 4216 true Scaffold265: 1-4216 Capsella grandiflora
Cagra.0265s0002 10.0kb upstream 10.0kb upstream 2675 false Scaffold265: 1-2675 Capsella grandiflora
Cagra.0265s0002 10.0kb downstream 10.0kb downstream 11541 true Scaffold265: 2676-14216 Capsella grandiflora
Cagra.0265s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold265: 4217-14216 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369663 5261 Brassicaceae View MSA
123827483 5264 Brassicales-Malvales View MSA
124345773 5266 SBM View MSA
124238500 5268 Malvidae View MSA
124061296 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain