Gene : Cagra.0277s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  2
Name:  ? Cagra.0277s0002 Secondary Identifier:  ? PAC:28911250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0277s0002 0.5kb upstream 0.5kb upstream 2417 true Scaffold277: 5741-8157 Capsella grandiflora
Cagra.0277s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold277: 5741-6240 Capsella grandiflora
Cagra.0277s0002 0.5kb downstream 0.5kb downstream 2417 true Scaffold277: 6241-8657 Capsella grandiflora
Cagra.0277s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold277: 8158-8657 Capsella grandiflora
Cagra.0277s0002 1.0kb upstream 1.0kb upstream 2917 true Scaffold277: 5241-8157 Capsella grandiflora
Cagra.0277s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold277: 5241-6240 Capsella grandiflora
Cagra.0277s0002 1.0kb downstream 1.0kb downstream 2917 true Scaffold277: 6241-9157 Capsella grandiflora
Cagra.0277s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold277: 8158-9157 Capsella grandiflora
Cagra.0277s0002 2.0kb upstream 2.0kb upstream 3917 true Scaffold277: 4241-8157 Capsella grandiflora
Cagra.0277s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold277: 4241-6240 Capsella grandiflora
Cagra.0277s0002 2.0kb downstream 2.0kb downstream 3917 true Scaffold277: 6241-10157 Capsella grandiflora
Cagra.0277s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold277: 8158-10157 Capsella grandiflora
Cagra.0277s0002 5.0kb upstream 5.0kb upstream 6917 true Scaffold277: 1241-8157 Capsella grandiflora
Cagra.0277s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold277: 1241-6240 Capsella grandiflora
Cagra.0277s0002 5.0kb downstream 5.0kb downstream 6917 true Scaffold277: 6241-13157 Capsella grandiflora
Cagra.0277s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold277: 8158-13157 Capsella grandiflora
Cagra.0277s0002 10.0kb upstream 10.0kb upstream 8157 true Scaffold277: 1-8157 Capsella grandiflora
Cagra.0277s0002 10.0kb upstream 10.0kb upstream 6240 false Scaffold277: 1-6240 Capsella grandiflora
Cagra.0277s0002 10.0kb downstream 10.0kb downstream 11917 true Scaffold277: 6241-18157 Capsella grandiflora
Cagra.0277s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold277: 8158-18157 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366958 5261 Brassicaceae View MSA
123835116 5264 Brassicales-Malvales View MSA
124339648 5266 SBM View MSA
124242568 5268 Malvidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain