Gene : Cagra.0248s0088 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10048:SF22 - PHOSPHATIDYLINOSITOL 4-KINASE BETA Genomic Order:  88
Name:  ? Cagra.0248s0088 Secondary Identifier:  ? PAC:28918827
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0088 0.5kb upstream 0.5kb upstream 7904 true Scaffold248: 313400-321303 Capsella grandiflora
Cagra.0248s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 320804-321303 Capsella grandiflora
Cagra.0248s0088 0.5kb downstream 0.5kb downstream 7904 true Scaffold248: 312900-320803 Capsella grandiflora
Cagra.0248s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 312900-313399 Capsella grandiflora
Cagra.0248s0088 1.0kb upstream 1.0kb upstream 8404 true Scaffold248: 313400-321803 Capsella grandiflora
Cagra.0248s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 320804-321803 Capsella grandiflora
Cagra.0248s0088 1.0kb downstream 1.0kb downstream 8404 true Scaffold248: 312400-320803 Capsella grandiflora
Cagra.0248s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 312400-313399 Capsella grandiflora
Cagra.0248s0088 2.0kb upstream 2.0kb upstream 9404 true Scaffold248: 313400-322803 Capsella grandiflora
Cagra.0248s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 320804-322803 Capsella grandiflora
Cagra.0248s0088 2.0kb downstream 2.0kb downstream 9404 true Scaffold248: 311400-320803 Capsella grandiflora
Cagra.0248s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 311400-313399 Capsella grandiflora
Cagra.0248s0088 5.0kb upstream 5.0kb upstream 12404 true Scaffold248: 313400-325803 Capsella grandiflora
Cagra.0248s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 320804-325803 Capsella grandiflora
Cagra.0248s0088 5.0kb downstream 5.0kb downstream 12404 true Scaffold248: 308400-320803 Capsella grandiflora
Cagra.0248s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 308400-313399 Capsella grandiflora
Cagra.0248s0088 10.0kb upstream 10.0kb upstream 17404 true Scaffold248: 313400-330803 Capsella grandiflora
Cagra.0248s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 320804-330803 Capsella grandiflora
Cagra.0248s0088 10.0kb downstream 10.0kb downstream 17404 true Scaffold248: 303400-320803 Capsella grandiflora
Cagra.0248s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 303400-313399 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376773 5261 Brassicaceae View MSA
123836100 5264 Brassicales-Malvales View MSA
124343790 5266 SBM View MSA
124239009 5268 Malvidae View MSA
124066780 5270 Rosid View MSA
123749784 5271 Pentapetalae View MSA
122786671 5272 Eudicot View MSA
122047104 5273 Angiosperm View MSA
121345174 5274 Embryophyte View MSA
123380170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain