Gene : Cagra.0248s0092 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31235:SF27 - PEROXIDASE 62-RELATED Genomic Order:  92
Name:  ? Cagra.0248s0092 Secondary Identifier:  ? PAC:28918946
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0092 0.5kb upstream 0.5kb upstream 2223 true Scaffold248: 331105-333327 Capsella grandiflora
Cagra.0248s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 332828-333327 Capsella grandiflora
Cagra.0248s0092 0.5kb downstream 0.5kb downstream 2223 true Scaffold248: 330605-332827 Capsella grandiflora
Cagra.0248s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 330605-331104 Capsella grandiflora
Cagra.0248s0092 1.0kb upstream 1.0kb upstream 2723 true Scaffold248: 331105-333827 Capsella grandiflora
Cagra.0248s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 332828-333827 Capsella grandiflora
Cagra.0248s0092 1.0kb downstream 1.0kb downstream 2723 true Scaffold248: 330105-332827 Capsella grandiflora
Cagra.0248s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 330105-331104 Capsella grandiflora
Cagra.0248s0092 2.0kb upstream 2.0kb upstream 3723 true Scaffold248: 331105-334827 Capsella grandiflora
Cagra.0248s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 332828-334827 Capsella grandiflora
Cagra.0248s0092 2.0kb downstream 2.0kb downstream 3723 true Scaffold248: 329105-332827 Capsella grandiflora
Cagra.0248s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 329105-331104 Capsella grandiflora
Cagra.0248s0092 5.0kb upstream 5.0kb upstream 6723 true Scaffold248: 331105-337827 Capsella grandiflora
Cagra.0248s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 332828-337827 Capsella grandiflora
Cagra.0248s0092 5.0kb downstream 5.0kb downstream 6723 true Scaffold248: 326105-332827 Capsella grandiflora
Cagra.0248s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 326105-331104 Capsella grandiflora
Cagra.0248s0092 10.0kb upstream 10.0kb upstream 11723 true Scaffold248: 331105-342827 Capsella grandiflora
Cagra.0248s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 332828-342827 Capsella grandiflora
Cagra.0248s0092 10.0kb downstream 10.0kb downstream 11723 true Scaffold248: 321105-332827 Capsella grandiflora
Cagra.0248s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 321105-331104 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510955 5273 Angiosperm View MSA
122370378 5261 Brassicaceae View MSA
123799950 5264 Brassicales-Malvales View MSA
124297418 5266 SBM View MSA
124149313 5268 Malvidae View MSA
123875141 5270 Rosid View MSA
123459014 5271 Pentapetalae View MSA
122494410 5272 Eudicot View MSA
120784028 5274 Embryophyte View MSA
122825969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain