Gene : Cagra.0248s0123 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22601:SF11 - OLIGOPEPTIDE TRANSPORTER 4 Genomic Order:  123
Name:  ? Cagra.0248s0123 Secondary Identifier:  ? PAC:28918962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0123 0.5kb upstream 0.5kb upstream 4929 true Scaffold248: 429964-434892 Capsella grandiflora
Cagra.0248s0123 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 434393-434892 Capsella grandiflora
Cagra.0248s0123 0.5kb downstream 0.5kb downstream 4929 true Scaffold248: 429464-434392 Capsella grandiflora
Cagra.0248s0123 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 429464-429963 Capsella grandiflora
Cagra.0248s0123 1.0kb upstream 1.0kb upstream 5429 true Scaffold248: 429964-435392 Capsella grandiflora
Cagra.0248s0123 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 434393-435392 Capsella grandiflora
Cagra.0248s0123 1.0kb downstream 1.0kb downstream 5429 true Scaffold248: 428964-434392 Capsella grandiflora
Cagra.0248s0123 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 428964-429963 Capsella grandiflora
Cagra.0248s0123 2.0kb upstream 2.0kb upstream 6429 true Scaffold248: 429964-436392 Capsella grandiflora
Cagra.0248s0123 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 434393-436392 Capsella grandiflora
Cagra.0248s0123 2.0kb downstream 2.0kb downstream 6429 true Scaffold248: 427964-434392 Capsella grandiflora
Cagra.0248s0123 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 427964-429963 Capsella grandiflora
Cagra.0248s0123 5.0kb upstream 5.0kb upstream 9429 true Scaffold248: 429964-439392 Capsella grandiflora
Cagra.0248s0123 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 434393-439392 Capsella grandiflora
Cagra.0248s0123 5.0kb downstream 5.0kb downstream 9429 true Scaffold248: 424964-434392 Capsella grandiflora
Cagra.0248s0123 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 424964-429963 Capsella grandiflora
Cagra.0248s0123 10.0kb upstream 10.0kb upstream 14429 true Scaffold248: 429964-444392 Capsella grandiflora
Cagra.0248s0123 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 434393-444392 Capsella grandiflora
Cagra.0248s0123 10.0kb downstream 10.0kb downstream 14429 true Scaffold248: 419964-434392 Capsella grandiflora
Cagra.0248s0123 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 419964-429963 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368517 5261 Brassicaceae View MSA
123828328 5264 Brassicales-Malvales View MSA
124336577 5266 SBM View MSA
124247375 5268 Malvidae View MSA
124072346 5270 Rosid View MSA
123738802 5271 Pentapetalae View MSA
122788637 5272 Eudicot View MSA
122046931 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain