Gene : Cagra.0248s0115 C. grandiflora v1.1
Defline:  (1 of 2) PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Genomic Order:  115
Name:  ? Cagra.0248s0115 Secondary Identifier:  ? PAC:28918934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0115 0.5kb upstream 0.5kb upstream 3426 true Scaffold248: 409308-412733 Capsella grandiflora
Cagra.0248s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 412234-412733 Capsella grandiflora
Cagra.0248s0115 0.5kb downstream 0.5kb downstream 3426 true Scaffold248: 408808-412233 Capsella grandiflora
Cagra.0248s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 408808-409307 Capsella grandiflora
Cagra.0248s0115 1.0kb upstream 1.0kb upstream 3926 true Scaffold248: 409308-413233 Capsella grandiflora
Cagra.0248s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 412234-413233 Capsella grandiflora
Cagra.0248s0115 1.0kb downstream 1.0kb downstream 3926 true Scaffold248: 408308-412233 Capsella grandiflora
Cagra.0248s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 408308-409307 Capsella grandiflora
Cagra.0248s0115 2.0kb upstream 2.0kb upstream 4926 true Scaffold248: 409308-414233 Capsella grandiflora
Cagra.0248s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 412234-414233 Capsella grandiflora
Cagra.0248s0115 2.0kb downstream 2.0kb downstream 4926 true Scaffold248: 407308-412233 Capsella grandiflora
Cagra.0248s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 407308-409307 Capsella grandiflora
Cagra.0248s0115 5.0kb upstream 5.0kb upstream 7926 true Scaffold248: 409308-417233 Capsella grandiflora
Cagra.0248s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 412234-417233 Capsella grandiflora
Cagra.0248s0115 5.0kb downstream 5.0kb downstream 7926 true Scaffold248: 404308-412233 Capsella grandiflora
Cagra.0248s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 404308-409307 Capsella grandiflora
Cagra.0248s0115 10.0kb upstream 10.0kb upstream 12926 true Scaffold248: 409308-422233 Capsella grandiflora
Cagra.0248s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 412234-422233 Capsella grandiflora
Cagra.0248s0115 10.0kb downstream 10.0kb downstream 12926 true Scaffold248: 399308-412233 Capsella grandiflora
Cagra.0248s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 399308-409307 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362429 5261 Brassicaceae View MSA
123837347 5264 Brassicales-Malvales View MSA
124346846 5266 SBM View MSA
124254408 5268 Malvidae View MSA
124065571 5270 Rosid View MSA
123750952 5271 Pentapetalae View MSA
122794096 5272 Eudicot View MSA
122042740 5273 Angiosperm View MSA
121310013 5274 Embryophyte View MSA
123347619 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain