Gene : Cagra.0255s0030 C. grandiflora v1.1
Defline:  (1 of 9) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  30
Name:  ? Cagra.0255s0030 Secondary Identifier:  ? PAC:28917669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0255s0030 0.5kb upstream 0.5kb upstream 4487 true Scaffold255: 103642-108128 Capsella grandiflora
Cagra.0255s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold255: 103642-104141 Capsella grandiflora
Cagra.0255s0030 0.5kb downstream 0.5kb downstream 4487 true Scaffold255: 104142-108628 Capsella grandiflora
Cagra.0255s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold255: 108129-108628 Capsella grandiflora
Cagra.0255s0030 1.0kb upstream 1.0kb upstream 4987 true Scaffold255: 103142-108128 Capsella grandiflora
Cagra.0255s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold255: 103142-104141 Capsella grandiflora
Cagra.0255s0030 1.0kb downstream 1.0kb downstream 4987 true Scaffold255: 104142-109128 Capsella grandiflora
Cagra.0255s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold255: 108129-109128 Capsella grandiflora
Cagra.0255s0030 2.0kb upstream 2.0kb upstream 5987 true Scaffold255: 102142-108128 Capsella grandiflora
Cagra.0255s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold255: 102142-104141 Capsella grandiflora
Cagra.0255s0030 2.0kb downstream 2.0kb downstream 5987 true Scaffold255: 104142-110128 Capsella grandiflora
Cagra.0255s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold255: 108129-110128 Capsella grandiflora
Cagra.0255s0030 5.0kb upstream 5.0kb upstream 8987 true Scaffold255: 99142-108128 Capsella grandiflora
Cagra.0255s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold255: 99142-104141 Capsella grandiflora
Cagra.0255s0030 5.0kb downstream 5.0kb downstream 8987 true Scaffold255: 104142-113128 Capsella grandiflora
Cagra.0255s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold255: 108129-113128 Capsella grandiflora
Cagra.0255s0030 10.0kb upstream 10.0kb upstream 13987 true Scaffold255: 94142-108128 Capsella grandiflora
Cagra.0255s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold255: 94142-104141 Capsella grandiflora
Cagra.0255s0030 10.0kb downstream 10.0kb downstream 13987 true Scaffold255: 104142-118128 Capsella grandiflora
Cagra.0255s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold255: 108129-118128 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366522 5261 Brassicaceae View MSA
123835697 5264 Brassicales-Malvales View MSA
124348560 5266 SBM View MSA
124246025 5268 Malvidae View MSA
124071815 5270 Rosid View MSA
123740566 5271 Pentapetalae View MSA
122791928 5272 Eudicot View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain