Gene : Cagra.0255s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11289 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 Genomic Order:  39
Name:  ? Cagra.0255s0039 Secondary Identifier:  ? PAC:28917659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0255s0039 0.5kb upstream 0.5kb upstream 6858 true Scaffold255: 130077-136934 Capsella grandiflora
Cagra.0255s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold255: 130077-130576 Capsella grandiflora
Cagra.0255s0039 0.5kb downstream 0.5kb downstream 6858 true Scaffold255: 130577-137434 Capsella grandiflora
Cagra.0255s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold255: 136935-137434 Capsella grandiflora
Cagra.0255s0039 1.0kb upstream 1.0kb upstream 7358 true Scaffold255: 129577-136934 Capsella grandiflora
Cagra.0255s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold255: 129577-130576 Capsella grandiflora
Cagra.0255s0039 1.0kb downstream 1.0kb downstream 7358 true Scaffold255: 130577-137934 Capsella grandiflora
Cagra.0255s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold255: 136935-137934 Capsella grandiflora
Cagra.0255s0039 2.0kb upstream 2.0kb upstream 8358 true Scaffold255: 128577-136934 Capsella grandiflora
Cagra.0255s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold255: 128577-130576 Capsella grandiflora
Cagra.0255s0039 2.0kb downstream 2.0kb downstream 8358 true Scaffold255: 130577-138934 Capsella grandiflora
Cagra.0255s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold255: 136935-138934 Capsella grandiflora
Cagra.0255s0039 5.0kb upstream 5.0kb upstream 11358 true Scaffold255: 125577-136934 Capsella grandiflora
Cagra.0255s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold255: 125577-130576 Capsella grandiflora
Cagra.0255s0039 5.0kb downstream 5.0kb downstream 11358 true Scaffold255: 130577-141934 Capsella grandiflora
Cagra.0255s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold255: 136935-141934 Capsella grandiflora
Cagra.0255s0039 10.0kb upstream 10.0kb upstream 16358 true Scaffold255: 120577-136934 Capsella grandiflora
Cagra.0255s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold255: 120577-130576 Capsella grandiflora
Cagra.0255s0039 10.0kb downstream 10.0kb downstream 16358 true Scaffold255: 130577-146934 Capsella grandiflora
Cagra.0255s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold255: 136935-146934 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361731 5261 Brassicaceae View MSA
123840779 5264 Brassicales-Malvales View MSA
124336841 5266 SBM View MSA
124247927 5268 Malvidae View MSA
124050402 5270 Rosid View MSA
123749189 5271 Pentapetalae View MSA
122786519 5272 Eudicot View MSA
122044461 5273 Angiosperm View MSA
121310297 5274 Embryophyte View MSA
123425131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain