Gene : Cagra.0248s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  13
Name:  ? Cagra.0248s0013 Secondary Identifier:  ? PAC:28918846
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-162 Capsella grandiflora pathologic  
Cgrandiflora PWY-6126 Capsella grandiflora pathologic  
Cgrandiflora PWY-6545 Capsella grandiflora pathologic  
Cgrandiflora PWY-7176 Capsella grandiflora pathologic  
Cgrandiflora PWY-7184 Capsella grandiflora pathologic  
Cgrandiflora PWY-7196 Capsella grandiflora pathologic  
Cgrandiflora PWY-7197 Capsella grandiflora pathologic  
Cgrandiflora PWY-7200 Capsella grandiflora pathologic  
Cgrandiflora PWY-7205 Capsella grandiflora pathologic  
Cgrandiflora PWY-7208 Capsella grandiflora pathologic  
Cgrandiflora PWY-7210 Capsella grandiflora pathologic  
Cgrandiflora PWY-7211 Capsella grandiflora pathologic  
Cgrandiflora PWY-7220 Capsella grandiflora pathologic  
Cgrandiflora PWY-7221 Capsella grandiflora pathologic  
Cgrandiflora PWY-7222 Capsella grandiflora pathologic  
Cgrandiflora PWY-7224 Capsella grandiflora pathologic  
Cgrandiflora PWY-7226 Capsella grandiflora pathologic  
Cgrandiflora PWY-7227 Capsella grandiflora pathologic  
Cgrandiflora PWY-7228 Capsella grandiflora pathologic  
Cgrandiflora PWY-7229 Capsella grandiflora pathologic  
Cgrandiflora PWY-841 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0013 0.5kb upstream 0.5kb upstream 2420 true Scaffold248: 34631-37050 Capsella grandiflora
Cagra.0248s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 36551-37050 Capsella grandiflora
Cagra.0248s0013 0.5kb downstream 0.5kb downstream 2420 true Scaffold248: 34131-36550 Capsella grandiflora
Cagra.0248s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 34131-34630 Capsella grandiflora
Cagra.0248s0013 1.0kb upstream 1.0kb upstream 2920 true Scaffold248: 34631-37550 Capsella grandiflora
Cagra.0248s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 36551-37550 Capsella grandiflora
Cagra.0248s0013 1.0kb downstream 1.0kb downstream 2920 true Scaffold248: 33631-36550 Capsella grandiflora
Cagra.0248s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 33631-34630 Capsella grandiflora
Cagra.0248s0013 2.0kb upstream 2.0kb upstream 3920 true Scaffold248: 34631-38550 Capsella grandiflora
Cagra.0248s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 36551-38550 Capsella grandiflora
Cagra.0248s0013 2.0kb downstream 2.0kb downstream 3920 true Scaffold248: 32631-36550 Capsella grandiflora
Cagra.0248s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 32631-34630 Capsella grandiflora
Cagra.0248s0013 5.0kb upstream 5.0kb upstream 6920 true Scaffold248: 34631-41550 Capsella grandiflora
Cagra.0248s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 36551-41550 Capsella grandiflora
Cagra.0248s0013 5.0kb downstream 5.0kb downstream 6920 true Scaffold248: 29631-36550 Capsella grandiflora
Cagra.0248s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 29631-34630 Capsella grandiflora
Cagra.0248s0013 10.0kb upstream 10.0kb upstream 11920 true Scaffold248: 34631-46550 Capsella grandiflora
Cagra.0248s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 36551-46550 Capsella grandiflora
Cagra.0248s0013 10.0kb downstream 10.0kb downstream 11920 true Scaffold248: 24631-36550 Capsella grandiflora
Cagra.0248s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 24631-34630 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372106 5261 Brassicaceae View MSA
123832017 5264 Brassicales-Malvales View MSA
124342170 5266 SBM View MSA
124242132 5268 Malvidae View MSA
124063920 5270 Rosid View MSA
123743535 5271 Pentapetalae View MSA
122788809 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain