Gene : Cagra.0248s0042 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED Genomic Order:  42
Name:  ? Cagra.0248s0042 Secondary Identifier:  ? PAC:28918877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0042 0.5kb upstream 0.5kb upstream 3966 true Scaffold248: 140913-144878 Capsella grandiflora
Cagra.0248s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 144379-144878 Capsella grandiflora
Cagra.0248s0042 0.5kb downstream 0.5kb downstream 3966 true Scaffold248: 140413-144378 Capsella grandiflora
Cagra.0248s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 140413-140912 Capsella grandiflora
Cagra.0248s0042 1.0kb upstream 1.0kb upstream 4466 true Scaffold248: 140913-145378 Capsella grandiflora
Cagra.0248s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 144379-145378 Capsella grandiflora
Cagra.0248s0042 1.0kb downstream 1.0kb downstream 4466 true Scaffold248: 139913-144378 Capsella grandiflora
Cagra.0248s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 139913-140912 Capsella grandiflora
Cagra.0248s0042 2.0kb upstream 2.0kb upstream 5466 true Scaffold248: 140913-146378 Capsella grandiflora
Cagra.0248s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 144379-146378 Capsella grandiflora
Cagra.0248s0042 2.0kb downstream 2.0kb downstream 5466 true Scaffold248: 138913-144378 Capsella grandiflora
Cagra.0248s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 138913-140912 Capsella grandiflora
Cagra.0248s0042 5.0kb upstream 5.0kb upstream 8466 true Scaffold248: 140913-149378 Capsella grandiflora
Cagra.0248s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 144379-149378 Capsella grandiflora
Cagra.0248s0042 5.0kb downstream 5.0kb downstream 8466 true Scaffold248: 135913-144378 Capsella grandiflora
Cagra.0248s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 135913-140912 Capsella grandiflora
Cagra.0248s0042 10.0kb upstream 10.0kb upstream 13466 true Scaffold248: 140913-154378 Capsella grandiflora
Cagra.0248s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 144379-154378 Capsella grandiflora
Cagra.0248s0042 10.0kb downstream 10.0kb downstream 13466 true Scaffold248: 130913-144378 Capsella grandiflora
Cagra.0248s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 130913-140912 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371665 5261 Brassicaceae View MSA
123837362 5264 Brassicales-Malvales View MSA
124340705 5266 SBM View MSA
124254646 5268 Malvidae View MSA
124063521 5270 Rosid View MSA
123738215 5271 Pentapetalae View MSA
122794289 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain