Gene : Cagra.0248s0057 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11255:SF46 - DIACYLGLYCEROL KINASE 2 Genomic Order:  57
Name:  ? Cagra.0248s0057 Secondary Identifier:  ? PAC:28918898
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0057 0.5kb upstream 0.5kb upstream 4287 true Scaffold248: 190577-194863 Capsella grandiflora
Cagra.0248s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 190577-191076 Capsella grandiflora
Cagra.0248s0057 0.5kb downstream 0.5kb downstream 4287 true Scaffold248: 191077-195363 Capsella grandiflora
Cagra.0248s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 194864-195363 Capsella grandiflora
Cagra.0248s0057 1.0kb upstream 1.0kb upstream 4787 true Scaffold248: 190077-194863 Capsella grandiflora
Cagra.0248s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 190077-191076 Capsella grandiflora
Cagra.0248s0057 1.0kb downstream 1.0kb downstream 4787 true Scaffold248: 191077-195863 Capsella grandiflora
Cagra.0248s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 194864-195863 Capsella grandiflora
Cagra.0248s0057 2.0kb upstream 2.0kb upstream 5787 true Scaffold248: 189077-194863 Capsella grandiflora
Cagra.0248s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 189077-191076 Capsella grandiflora
Cagra.0248s0057 2.0kb downstream 2.0kb downstream 5787 true Scaffold248: 191077-196863 Capsella grandiflora
Cagra.0248s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 194864-196863 Capsella grandiflora
Cagra.0248s0057 5.0kb upstream 5.0kb upstream 8787 true Scaffold248: 186077-194863 Capsella grandiflora
Cagra.0248s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 186077-191076 Capsella grandiflora
Cagra.0248s0057 5.0kb downstream 5.0kb downstream 8787 true Scaffold248: 191077-199863 Capsella grandiflora
Cagra.0248s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 194864-199863 Capsella grandiflora
Cagra.0248s0057 10.0kb upstream 10.0kb upstream 13787 true Scaffold248: 181077-194863 Capsella grandiflora
Cagra.0248s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 181077-191076 Capsella grandiflora
Cagra.0248s0057 10.0kb downstream 10.0kb downstream 13787 true Scaffold248: 191077-204863 Capsella grandiflora
Cagra.0248s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 194864-204863 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373501 5261 Brassicaceae View MSA
123800567 5264 Brassicales-Malvales View MSA
124340975 5266 SBM View MSA
124242001 5268 Malvidae View MSA
124067842 5270 Rosid View MSA
123739779 5271 Pentapetalae View MSA
122786714 5272 Eudicot View MSA
122043773 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349356 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain