Gene : Cagra.0248s0074 C. grandiflora v1.1
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  74
Name:  ? Cagra.0248s0074 Secondary Identifier:  ? PAC:28918965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0248s0074 0.5kb upstream 0.5kb upstream 1396 true Scaffold248: 262937-264332 Capsella grandiflora
Cagra.0248s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold248: 262937-263436 Capsella grandiflora
Cagra.0248s0074 0.5kb downstream 0.5kb downstream 1396 true Scaffold248: 263437-264832 Capsella grandiflora
Cagra.0248s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold248: 264333-264832 Capsella grandiflora
Cagra.0248s0074 1.0kb upstream 1.0kb upstream 1896 true Scaffold248: 262437-264332 Capsella grandiflora
Cagra.0248s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold248: 262437-263436 Capsella grandiflora
Cagra.0248s0074 1.0kb downstream 1.0kb downstream 1896 true Scaffold248: 263437-265332 Capsella grandiflora
Cagra.0248s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold248: 264333-265332 Capsella grandiflora
Cagra.0248s0074 2.0kb upstream 2.0kb upstream 2896 true Scaffold248: 261437-264332 Capsella grandiflora
Cagra.0248s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold248: 261437-263436 Capsella grandiflora
Cagra.0248s0074 2.0kb downstream 2.0kb downstream 2896 true Scaffold248: 263437-266332 Capsella grandiflora
Cagra.0248s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold248: 264333-266332 Capsella grandiflora
Cagra.0248s0074 5.0kb upstream 5.0kb upstream 5896 true Scaffold248: 258437-264332 Capsella grandiflora
Cagra.0248s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold248: 258437-263436 Capsella grandiflora
Cagra.0248s0074 5.0kb downstream 5.0kb downstream 5896 true Scaffold248: 263437-269332 Capsella grandiflora
Cagra.0248s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold248: 264333-269332 Capsella grandiflora
Cagra.0248s0074 10.0kb upstream 10.0kb upstream 10896 true Scaffold248: 253437-264332 Capsella grandiflora
Cagra.0248s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold248: 253437-263436 Capsella grandiflora
Cagra.0248s0074 10.0kb downstream 10.0kb downstream 10896 true Scaffold248: 263437-274332 Capsella grandiflora
Cagra.0248s0074 10.0kb downstream 10.0kb downstream 10000 false Scaffold248: 264333-274332 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363399 5261 Brassicaceae View MSA
123834833 5264 Brassicales-Malvales View MSA
124344553 5266 SBM View MSA
124240807 5268 Malvidae View MSA
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain