Gene : Cagra.0239s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11048:SF3 - PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL Genomic Order:  2
Name:  ? Cagra.0239s0002 Secondary Identifier:  ? PAC:28915496
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0002 0.5kb upstream 0.5kb upstream 3024 true Scaffold239: 2097-5120 Capsella grandiflora
Cagra.0239s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 2097-2596 Capsella grandiflora
Cagra.0239s0002 0.5kb downstream 0.5kb downstream 3024 true Scaffold239: 2597-5620 Capsella grandiflora
Cagra.0239s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 5121-5620 Capsella grandiflora
Cagra.0239s0002 1.0kb upstream 1.0kb upstream 3524 true Scaffold239: 1597-5120 Capsella grandiflora
Cagra.0239s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 1597-2596 Capsella grandiflora
Cagra.0239s0002 1.0kb downstream 1.0kb downstream 3524 true Scaffold239: 2597-6120 Capsella grandiflora
Cagra.0239s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 5121-6120 Capsella grandiflora
Cagra.0239s0002 2.0kb upstream 2.0kb upstream 4524 true Scaffold239: 597-5120 Capsella grandiflora
Cagra.0239s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 597-2596 Capsella grandiflora
Cagra.0239s0002 2.0kb downstream 2.0kb downstream 4524 true Scaffold239: 2597-7120 Capsella grandiflora
Cagra.0239s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 5121-7120 Capsella grandiflora
Cagra.0239s0002 5.0kb upstream 5.0kb upstream 5120 true Scaffold239: 1-5120 Capsella grandiflora
Cagra.0239s0002 5.0kb upstream 5.0kb upstream 2596 false Scaffold239: 1-2596 Capsella grandiflora
Cagra.0239s0002 5.0kb downstream 5.0kb downstream 7524 true Scaffold239: 2597-10120 Capsella grandiflora
Cagra.0239s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 5121-10120 Capsella grandiflora
Cagra.0239s0002 10.0kb upstream 10.0kb upstream 5120 true Scaffold239: 1-5120 Capsella grandiflora
Cagra.0239s0002 10.0kb upstream 10.0kb upstream 2596 false Scaffold239: 1-2596 Capsella grandiflora
Cagra.0239s0002 10.0kb downstream 10.0kb downstream 12524 true Scaffold239: 2597-15120 Capsella grandiflora
Cagra.0239s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 5121-15120 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370140 5261 Brassicaceae View MSA
123829478 5264 Brassicales-Malvales View MSA
124344168 5266 SBM View MSA
124238868 5268 Malvidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain