Gene : Cagra.0239s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13395 - SISTER CHROMATID COHESION PROTEIN DCC1-RELATED Genomic Order:  7
Name:  ? Cagra.0239s0007 Secondary Identifier:  ? PAC:28915425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0007 0.5kb upstream 0.5kb upstream 2119 true Scaffold239: 14601-16719 Capsella grandiflora
Cagra.0239s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 16220-16719 Capsella grandiflora
Cagra.0239s0007 0.5kb downstream 0.5kb downstream 2119 true Scaffold239: 14101-16219 Capsella grandiflora
Cagra.0239s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 14101-14600 Capsella grandiflora
Cagra.0239s0007 1.0kb upstream 1.0kb upstream 2619 true Scaffold239: 14601-17219 Capsella grandiflora
Cagra.0239s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 16220-17219 Capsella grandiflora
Cagra.0239s0007 1.0kb downstream 1.0kb downstream 2619 true Scaffold239: 13601-16219 Capsella grandiflora
Cagra.0239s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 13601-14600 Capsella grandiflora
Cagra.0239s0007 2.0kb upstream 2.0kb upstream 3619 true Scaffold239: 14601-18219 Capsella grandiflora
Cagra.0239s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 16220-18219 Capsella grandiflora
Cagra.0239s0007 2.0kb downstream 2.0kb downstream 3619 true Scaffold239: 12601-16219 Capsella grandiflora
Cagra.0239s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 12601-14600 Capsella grandiflora
Cagra.0239s0007 5.0kb upstream 5.0kb upstream 6619 true Scaffold239: 14601-21219 Capsella grandiflora
Cagra.0239s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 16220-21219 Capsella grandiflora
Cagra.0239s0007 5.0kb downstream 5.0kb downstream 6619 true Scaffold239: 9601-16219 Capsella grandiflora
Cagra.0239s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 9601-14600 Capsella grandiflora
Cagra.0239s0007 10.0kb upstream 10.0kb upstream 11619 true Scaffold239: 14601-26219 Capsella grandiflora
Cagra.0239s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 16220-26219 Capsella grandiflora
Cagra.0239s0007 10.0kb downstream 10.0kb downstream 11619 true Scaffold239: 4601-16219 Capsella grandiflora
Cagra.0239s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 4601-14600 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365592 5261 Brassicaceae View MSA
123830562 5264 Brassicales-Malvales View MSA
124337546 5266 SBM View MSA
124241698 5268 Malvidae View MSA
124066083 5270 Rosid View MSA
123738990 5271 Pentapetalae View MSA
122785967 5272 Eudicot View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain