Gene : Cagra.0239s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22298:SF12 - ENDOGLUCANASE 12-RELATED Genomic Order:  5
Name:  ? Cagra.0239s0005 Secondary Identifier:  ? PAC:28915479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0005 0.5kb upstream 0.5kb upstream 2531 true Scaffold239: 10226-12756 Capsella grandiflora
Cagra.0239s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 12257-12756 Capsella grandiflora
Cagra.0239s0005 0.5kb downstream 0.5kb downstream 2531 true Scaffold239: 9726-12256 Capsella grandiflora
Cagra.0239s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 9726-10225 Capsella grandiflora
Cagra.0239s0005 1.0kb upstream 1.0kb upstream 3031 true Scaffold239: 10226-13256 Capsella grandiflora
Cagra.0239s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 12257-13256 Capsella grandiflora
Cagra.0239s0005 1.0kb downstream 1.0kb downstream 3031 true Scaffold239: 9226-12256 Capsella grandiflora
Cagra.0239s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 9226-10225 Capsella grandiflora
Cagra.0239s0005 2.0kb upstream 2.0kb upstream 4031 true Scaffold239: 10226-14256 Capsella grandiflora
Cagra.0239s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 12257-14256 Capsella grandiflora
Cagra.0239s0005 2.0kb downstream 2.0kb downstream 4031 true Scaffold239: 8226-12256 Capsella grandiflora
Cagra.0239s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 8226-10225 Capsella grandiflora
Cagra.0239s0005 5.0kb upstream 5.0kb upstream 7031 true Scaffold239: 10226-17256 Capsella grandiflora
Cagra.0239s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 12257-17256 Capsella grandiflora
Cagra.0239s0005 5.0kb downstream 5.0kb downstream 7031 true Scaffold239: 5226-12256 Capsella grandiflora
Cagra.0239s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 5226-10225 Capsella grandiflora
Cagra.0239s0005 10.0kb upstream 10.0kb upstream 12031 true Scaffold239: 10226-22256 Capsella grandiflora
Cagra.0239s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 12257-22256 Capsella grandiflora
Cagra.0239s0005 10.0kb downstream 10.0kb downstream 12031 true Scaffold239: 226-12256 Capsella grandiflora
Cagra.0239s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 226-10225 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027453 5273 Angiosperm View MSA
122381298 5261 Brassicaceae View MSA
123803169 5264 Brassicales-Malvales View MSA
124300299 5266 SBM View MSA
124241233 5268 Malvidae View MSA
124064764 5270 Rosid View MSA
123739833 5271 Pentapetalae View MSA
122794164 5272 Eudicot View MSA
121297103 5274 Embryophyte View MSA
123428473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain