Gene : Cagra.0239s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR20863//PTHR20863:SF30 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  11
Name:  ? Cagra.0239s0011 Secondary Identifier:  ? PAC:28915482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0011 0.5kb upstream 0.5kb upstream 1526 true Scaffold239: 28252-29777 Capsella grandiflora
Cagra.0239s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 28252-28751 Capsella grandiflora
Cagra.0239s0011 0.5kb downstream 0.5kb downstream 1526 true Scaffold239: 28752-30277 Capsella grandiflora
Cagra.0239s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 29778-30277 Capsella grandiflora
Cagra.0239s0011 1.0kb upstream 1.0kb upstream 2026 true Scaffold239: 27752-29777 Capsella grandiflora
Cagra.0239s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 27752-28751 Capsella grandiflora
Cagra.0239s0011 1.0kb downstream 1.0kb downstream 2026 true Scaffold239: 28752-30777 Capsella grandiflora
Cagra.0239s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 29778-30777 Capsella grandiflora
Cagra.0239s0011 2.0kb upstream 2.0kb upstream 3026 true Scaffold239: 26752-29777 Capsella grandiflora
Cagra.0239s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 26752-28751 Capsella grandiflora
Cagra.0239s0011 2.0kb downstream 2.0kb downstream 3026 true Scaffold239: 28752-31777 Capsella grandiflora
Cagra.0239s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 29778-31777 Capsella grandiflora
Cagra.0239s0011 5.0kb upstream 5.0kb upstream 6026 true Scaffold239: 23752-29777 Capsella grandiflora
Cagra.0239s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 23752-28751 Capsella grandiflora
Cagra.0239s0011 5.0kb downstream 5.0kb downstream 6026 true Scaffold239: 28752-34777 Capsella grandiflora
Cagra.0239s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 29778-34777 Capsella grandiflora
Cagra.0239s0011 10.0kb upstream 10.0kb upstream 11026 true Scaffold239: 18752-29777 Capsella grandiflora
Cagra.0239s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 18752-28751 Capsella grandiflora
Cagra.0239s0011 10.0kb downstream 10.0kb downstream 11026 true Scaffold239: 28752-39777 Capsella grandiflora
Cagra.0239s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 29778-39777 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377965 5261 Brassicaceae View MSA
123836578 5264 Brassicales-Malvales View MSA
124346640 5266 SBM View MSA
124251650 5268 Malvidae View MSA
124069611 5270 Rosid View MSA
123746919 5271 Pentapetalae View MSA
122794708 5272 Eudicot View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain