Gene : Cagra.0239s0023 C. grandiflora v1.1
Defline:  (1 of 20) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  23
Name:  ? Cagra.0239s0023 Secondary Identifier:  ? PAC:28915463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0023 0.5kb upstream 0.5kb upstream 2071 true Scaffold239: 60384-62454 Capsella grandiflora
Cagra.0239s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 60384-60883 Capsella grandiflora
Cagra.0239s0023 0.5kb downstream 0.5kb downstream 2071 true Scaffold239: 60884-62954 Capsella grandiflora
Cagra.0239s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 62455-62954 Capsella grandiflora
Cagra.0239s0023 1.0kb upstream 1.0kb upstream 2571 true Scaffold239: 59884-62454 Capsella grandiflora
Cagra.0239s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 59884-60883 Capsella grandiflora
Cagra.0239s0023 1.0kb downstream 1.0kb downstream 2571 true Scaffold239: 60884-63454 Capsella grandiflora
Cagra.0239s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 62455-63454 Capsella grandiflora
Cagra.0239s0023 2.0kb upstream 2.0kb upstream 3571 true Scaffold239: 58884-62454 Capsella grandiflora
Cagra.0239s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 58884-60883 Capsella grandiflora
Cagra.0239s0023 2.0kb downstream 2.0kb downstream 3571 true Scaffold239: 60884-64454 Capsella grandiflora
Cagra.0239s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 62455-64454 Capsella grandiflora
Cagra.0239s0023 5.0kb upstream 5.0kb upstream 6571 true Scaffold239: 55884-62454 Capsella grandiflora
Cagra.0239s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 55884-60883 Capsella grandiflora
Cagra.0239s0023 5.0kb downstream 5.0kb downstream 6571 true Scaffold239: 60884-67454 Capsella grandiflora
Cagra.0239s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 62455-67454 Capsella grandiflora
Cagra.0239s0023 10.0kb upstream 10.0kb upstream 11571 true Scaffold239: 50884-62454 Capsella grandiflora
Cagra.0239s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 50884-60883 Capsella grandiflora
Cagra.0239s0023 10.0kb downstream 10.0kb downstream 11571 true Scaffold239: 60884-72454 Capsella grandiflora
Cagra.0239s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 62455-72454 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380283 5261 Brassicaceae View MSA
123841287 5264 Brassicales-Malvales View MSA
124348414 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain