Gene : Cagra.0239s0034 C. grandiflora v1.1
Defline:  (1 of 3) PTHR21450:SF9 - BZIP-LIKE PROTEIN-RELATED Genomic Order:  34
Name:  ? Cagra.0239s0034 Secondary Identifier:  ? PAC:28915470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0034 0.5kb upstream 0.5kb upstream 4265 true Scaffold239: 116019-120283 Capsella grandiflora
Cagra.0239s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 119784-120283 Capsella grandiflora
Cagra.0239s0034 0.5kb downstream 0.5kb downstream 4265 true Scaffold239: 115519-119783 Capsella grandiflora
Cagra.0239s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 115519-116018 Capsella grandiflora
Cagra.0239s0034 1.0kb upstream 1.0kb upstream 4765 true Scaffold239: 116019-120783 Capsella grandiflora
Cagra.0239s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 119784-120783 Capsella grandiflora
Cagra.0239s0034 1.0kb downstream 1.0kb downstream 4765 true Scaffold239: 115019-119783 Capsella grandiflora
Cagra.0239s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 115019-116018 Capsella grandiflora
Cagra.0239s0034 2.0kb upstream 2.0kb upstream 5765 true Scaffold239: 116019-121783 Capsella grandiflora
Cagra.0239s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 119784-121783 Capsella grandiflora
Cagra.0239s0034 2.0kb downstream 2.0kb downstream 5765 true Scaffold239: 114019-119783 Capsella grandiflora
Cagra.0239s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 114019-116018 Capsella grandiflora
Cagra.0239s0034 5.0kb upstream 5.0kb upstream 8765 true Scaffold239: 116019-124783 Capsella grandiflora
Cagra.0239s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 119784-124783 Capsella grandiflora
Cagra.0239s0034 5.0kb downstream 5.0kb downstream 8765 true Scaffold239: 111019-119783 Capsella grandiflora
Cagra.0239s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 111019-116018 Capsella grandiflora
Cagra.0239s0034 10.0kb upstream 10.0kb upstream 13765 true Scaffold239: 116019-129783 Capsella grandiflora
Cagra.0239s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 119784-129783 Capsella grandiflora
Cagra.0239s0034 10.0kb downstream 10.0kb downstream 13765 true Scaffold239: 106019-119783 Capsella grandiflora
Cagra.0239s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 106019-116018 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370035 5261 Brassicaceae View MSA
123837662 5264 Brassicales-Malvales View MSA
124342110 5266 SBM View MSA
124238222 5268 Malvidae View MSA
124074142 5270 Rosid View MSA
123750775 5271 Pentapetalae View MSA
122790180 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain