Gene : Cagra.0239s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15907:SF35 - GENE1000 PROTEIN-RELATED Genomic Order:  54
Name:  ? Cagra.0239s0054 Secondary Identifier:  ? PAC:28915445
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0239s0054 0.5kb upstream 0.5kb upstream 2458 true Scaffold239: 193360-195817 Capsella grandiflora
Cagra.0239s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold239: 193360-193859 Capsella grandiflora
Cagra.0239s0054 0.5kb downstream 0.5kb downstream 2458 true Scaffold239: 193860-196317 Capsella grandiflora
Cagra.0239s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold239: 195818-196317 Capsella grandiflora
Cagra.0239s0054 1.0kb upstream 1.0kb upstream 2958 true Scaffold239: 192860-195817 Capsella grandiflora
Cagra.0239s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold239: 192860-193859 Capsella grandiflora
Cagra.0239s0054 1.0kb downstream 1.0kb downstream 2958 true Scaffold239: 193860-196817 Capsella grandiflora
Cagra.0239s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold239: 195818-196817 Capsella grandiflora
Cagra.0239s0054 2.0kb upstream 2.0kb upstream 3958 true Scaffold239: 191860-195817 Capsella grandiflora
Cagra.0239s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold239: 191860-193859 Capsella grandiflora
Cagra.0239s0054 2.0kb downstream 2.0kb downstream 3958 true Scaffold239: 193860-197817 Capsella grandiflora
Cagra.0239s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold239: 195818-197817 Capsella grandiflora
Cagra.0239s0054 5.0kb upstream 5.0kb upstream 6958 true Scaffold239: 188860-195817 Capsella grandiflora
Cagra.0239s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold239: 188860-193859 Capsella grandiflora
Cagra.0239s0054 5.0kb downstream 5.0kb downstream 6958 true Scaffold239: 193860-200817 Capsella grandiflora
Cagra.0239s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold239: 195818-200817 Capsella grandiflora
Cagra.0239s0054 10.0kb upstream 10.0kb upstream 11958 true Scaffold239: 183860-195817 Capsella grandiflora
Cagra.0239s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold239: 183860-193859 Capsella grandiflora
Cagra.0239s0054 10.0kb downstream 10.0kb downstream 11958 true Scaffold239: 193860-205817 Capsella grandiflora
Cagra.0239s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold239: 195818-205817 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371756 5261 Brassicaceae View MSA
123835611 5264 Brassicales-Malvales View MSA
124341161 5266 SBM View MSA
124253642 5268 Malvidae View MSA
124071664 5270 Rosid View MSA
123743444 5271 Pentapetalae View MSA
122790372 5272 Eudicot View MSA
122043074 5273 Angiosperm View MSA
123429155 5275 Viridiplantae View MSA
121346562 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain