Gene : Cagra.0216s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13343:SF18 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  35
Name:  ? Cagra.0216s0035 Secondary Identifier:  ? PAC:28914352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0035 0.5kb upstream 0.5kb upstream 4408 true Scaffold216: 137550-141957 Capsella grandiflora
Cagra.0216s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 137550-138049 Capsella grandiflora
Cagra.0216s0035 0.5kb downstream 0.5kb downstream 4408 true Scaffold216: 138050-142457 Capsella grandiflora
Cagra.0216s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 141958-142457 Capsella grandiflora
Cagra.0216s0035 1.0kb upstream 1.0kb upstream 4908 true Scaffold216: 137050-141957 Capsella grandiflora
Cagra.0216s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 137050-138049 Capsella grandiflora
Cagra.0216s0035 1.0kb downstream 1.0kb downstream 4908 true Scaffold216: 138050-142957 Capsella grandiflora
Cagra.0216s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 141958-142957 Capsella grandiflora
Cagra.0216s0035 2.0kb upstream 2.0kb upstream 5908 true Scaffold216: 136050-141957 Capsella grandiflora
Cagra.0216s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 136050-138049 Capsella grandiflora
Cagra.0216s0035 2.0kb downstream 2.0kb downstream 5908 true Scaffold216: 138050-143957 Capsella grandiflora
Cagra.0216s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 141958-143957 Capsella grandiflora
Cagra.0216s0035 5.0kb upstream 5.0kb upstream 8908 true Scaffold216: 133050-141957 Capsella grandiflora
Cagra.0216s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 133050-138049 Capsella grandiflora
Cagra.0216s0035 5.0kb downstream 5.0kb downstream 8908 true Scaffold216: 138050-146957 Capsella grandiflora
Cagra.0216s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 141958-146957 Capsella grandiflora
Cagra.0216s0035 10.0kb upstream 10.0kb upstream 13908 true Scaffold216: 128050-141957 Capsella grandiflora
Cagra.0216s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 128050-138049 Capsella grandiflora
Cagra.0216s0035 10.0kb downstream 10.0kb downstream 13908 true Scaffold216: 138050-151957 Capsella grandiflora
Cagra.0216s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold216: 141958-151957 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362046 5261 Brassicaceae View MSA
123832420 5264 Brassicales-Malvales View MSA
124321797 5266 SBM View MSA
124247203 5268 Malvidae View MSA
124068606 5270 Rosid View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain