Gene : Cagra.0218s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Genomic Order:  5
Name:  ? Cagra.0218s0005 Secondary Identifier:  ? PAC:28901960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0218s0005 0.5kb upstream 0.5kb upstream 3141 true Scaffold218: 17219-20359 Capsella grandiflora
Cagra.0218s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold218: 17219-17718 Capsella grandiflora
Cagra.0218s0005 0.5kb downstream 0.5kb downstream 3141 true Scaffold218: 17719-20859 Capsella grandiflora
Cagra.0218s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold218: 20360-20859 Capsella grandiflora
Cagra.0218s0005 1.0kb upstream 1.0kb upstream 3641 true Scaffold218: 16719-20359 Capsella grandiflora
Cagra.0218s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold218: 16719-17718 Capsella grandiflora
Cagra.0218s0005 1.0kb downstream 1.0kb downstream 3641 true Scaffold218: 17719-21359 Capsella grandiflora
Cagra.0218s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold218: 20360-21359 Capsella grandiflora
Cagra.0218s0005 2.0kb upstream 2.0kb upstream 4641 true Scaffold218: 15719-20359 Capsella grandiflora
Cagra.0218s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold218: 15719-17718 Capsella grandiflora
Cagra.0218s0005 2.0kb downstream 2.0kb downstream 4641 true Scaffold218: 17719-22359 Capsella grandiflora
Cagra.0218s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold218: 20360-22359 Capsella grandiflora
Cagra.0218s0005 5.0kb upstream 5.0kb upstream 7641 true Scaffold218: 12719-20359 Capsella grandiflora
Cagra.0218s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold218: 12719-17718 Capsella grandiflora
Cagra.0218s0005 5.0kb downstream 5.0kb downstream 7641 true Scaffold218: 17719-25359 Capsella grandiflora
Cagra.0218s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold218: 20360-25359 Capsella grandiflora
Cagra.0218s0005 10.0kb upstream 10.0kb upstream 12641 true Scaffold218: 7719-20359 Capsella grandiflora
Cagra.0218s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold218: 7719-17718 Capsella grandiflora
Cagra.0218s0005 10.0kb downstream 10.0kb downstream 12641 true Scaffold218: 17719-30359 Capsella grandiflora
Cagra.0218s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold218: 20360-30359 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041490 5273 Angiosperm View MSA
122360489 5261 Brassicaceae View MSA
123831068 5264 Brassicales-Malvales View MSA
124349304 5266 SBM View MSA
124252266 5268 Malvidae View MSA
124071726 5270 Rosid View MSA
123747107 5271 Pentapetalae View MSA
122792156 5272 Eudicot View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain