Gene : Cagra.0228s0032 C. grandiflora v1.1
Defline:  (1 of 8) PTHR21470 - NTKL-BINDING PROTEIN 1 Genomic Order:  32
Name:  ? Cagra.0228s0032 Secondary Identifier:  ? PAC:28914687
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0228s0032 0.5kb upstream 0.5kb upstream 2056 true Scaffold228: 116693-118748 Capsella grandiflora
Cagra.0228s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold228: 116693-117192 Capsella grandiflora
Cagra.0228s0032 0.5kb downstream 0.5kb downstream 2056 true Scaffold228: 117193-119248 Capsella grandiflora
Cagra.0228s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold228: 118749-119248 Capsella grandiflora
Cagra.0228s0032 1.0kb upstream 1.0kb upstream 2556 true Scaffold228: 116193-118748 Capsella grandiflora
Cagra.0228s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold228: 116193-117192 Capsella grandiflora
Cagra.0228s0032 1.0kb downstream 1.0kb downstream 2556 true Scaffold228: 117193-119748 Capsella grandiflora
Cagra.0228s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold228: 118749-119748 Capsella grandiflora
Cagra.0228s0032 2.0kb upstream 2.0kb upstream 3556 true Scaffold228: 115193-118748 Capsella grandiflora
Cagra.0228s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold228: 115193-117192 Capsella grandiflora
Cagra.0228s0032 2.0kb downstream 2.0kb downstream 3556 true Scaffold228: 117193-120748 Capsella grandiflora
Cagra.0228s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold228: 118749-120748 Capsella grandiflora
Cagra.0228s0032 5.0kb upstream 5.0kb upstream 6556 true Scaffold228: 112193-118748 Capsella grandiflora
Cagra.0228s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold228: 112193-117192 Capsella grandiflora
Cagra.0228s0032 5.0kb downstream 5.0kb downstream 6556 true Scaffold228: 117193-123748 Capsella grandiflora
Cagra.0228s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold228: 118749-123748 Capsella grandiflora
Cagra.0228s0032 10.0kb upstream 10.0kb upstream 11556 true Scaffold228: 107193-118748 Capsella grandiflora
Cagra.0228s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold228: 107193-117192 Capsella grandiflora
Cagra.0228s0032 10.0kb downstream 10.0kb downstream 11556 true Scaffold228: 117193-128748 Capsella grandiflora
Cagra.0228s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold228: 118749-128748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375670 5261 Brassicaceae View MSA
123801018 5264 Brassicales-Malvales View MSA
124298365 5266 SBM View MSA
124245895 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain