Gene : Cagra.0228s0047 C. grandiflora v1.1
Defline:  (1 of 15) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  47
Name:  ? Cagra.0228s0047 Secondary Identifier:  ? PAC:28914725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0228s0047 0.5kb upstream 0.5kb upstream 2851 true Scaffold228: 186352-189202 Capsella grandiflora
Cagra.0228s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold228: 186352-186851 Capsella grandiflora
Cagra.0228s0047 0.5kb downstream 0.5kb downstream 2851 true Scaffold228: 186852-189702 Capsella grandiflora
Cagra.0228s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold228: 189203-189702 Capsella grandiflora
Cagra.0228s0047 1.0kb upstream 1.0kb upstream 3351 true Scaffold228: 185852-189202 Capsella grandiflora
Cagra.0228s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold228: 185852-186851 Capsella grandiflora
Cagra.0228s0047 1.0kb downstream 1.0kb downstream 3351 true Scaffold228: 186852-190202 Capsella grandiflora
Cagra.0228s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold228: 189203-190202 Capsella grandiflora
Cagra.0228s0047 2.0kb upstream 2.0kb upstream 4351 true Scaffold228: 184852-189202 Capsella grandiflora
Cagra.0228s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold228: 184852-186851 Capsella grandiflora
Cagra.0228s0047 2.0kb downstream 2.0kb downstream 4351 true Scaffold228: 186852-191202 Capsella grandiflora
Cagra.0228s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold228: 189203-191202 Capsella grandiflora
Cagra.0228s0047 5.0kb upstream 5.0kb upstream 7351 true Scaffold228: 181852-189202 Capsella grandiflora
Cagra.0228s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold228: 181852-186851 Capsella grandiflora
Cagra.0228s0047 5.0kb downstream 5.0kb downstream 7351 true Scaffold228: 186852-194202 Capsella grandiflora
Cagra.0228s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold228: 189203-194202 Capsella grandiflora
Cagra.0228s0047 10.0kb upstream 10.0kb upstream 12351 true Scaffold228: 176852-189202 Capsella grandiflora
Cagra.0228s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold228: 176852-186851 Capsella grandiflora
Cagra.0228s0047 10.0kb downstream 10.0kb downstream 12351 true Scaffold228: 186852-199202 Capsella grandiflora
Cagra.0228s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold228: 189203-199202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371733 5261 Brassicaceae View MSA
123831082 5264 Brassicales-Malvales View MSA
124345247 5266 SBM View MSA
124238985 5268 Malvidae View MSA
124060895 5270 Rosid View MSA
123741027 5271 Pentapetalae View MSA
122787124 5272 Eudicot View MSA
122047752 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain