Gene : Cagra.0202s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  21
Name:  ? Cagra.0202s0021 Secondary Identifier:  ? PAC:28919041
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-662 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0021 0.5kb upstream 0.5kb upstream 2804 true Scaffold202: 63008-65811 Capsella grandiflora
Cagra.0202s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 65312-65811 Capsella grandiflora
Cagra.0202s0021 0.5kb downstream 0.5kb downstream 2804 true Scaffold202: 62508-65311 Capsella grandiflora
Cagra.0202s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 62508-63007 Capsella grandiflora
Cagra.0202s0021 1.0kb upstream 1.0kb upstream 3304 true Scaffold202: 63008-66311 Capsella grandiflora
Cagra.0202s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 65312-66311 Capsella grandiflora
Cagra.0202s0021 1.0kb downstream 1.0kb downstream 3304 true Scaffold202: 62008-65311 Capsella grandiflora
Cagra.0202s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 62008-63007 Capsella grandiflora
Cagra.0202s0021 2.0kb upstream 2.0kb upstream 4304 true Scaffold202: 63008-67311 Capsella grandiflora
Cagra.0202s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 65312-67311 Capsella grandiflora
Cagra.0202s0021 2.0kb downstream 2.0kb downstream 4304 true Scaffold202: 61008-65311 Capsella grandiflora
Cagra.0202s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 61008-63007 Capsella grandiflora
Cagra.0202s0021 5.0kb upstream 5.0kb upstream 7304 true Scaffold202: 63008-70311 Capsella grandiflora
Cagra.0202s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 65312-70311 Capsella grandiflora
Cagra.0202s0021 5.0kb downstream 5.0kb downstream 7304 true Scaffold202: 58008-65311 Capsella grandiflora
Cagra.0202s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 58008-63007 Capsella grandiflora
Cagra.0202s0021 10.0kb upstream 10.0kb upstream 12304 true Scaffold202: 63008-75311 Capsella grandiflora
Cagra.0202s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 65312-75311 Capsella grandiflora
Cagra.0202s0021 10.0kb downstream 10.0kb downstream 12304 true Scaffold202: 53008-65311 Capsella grandiflora
Cagra.0202s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 53008-63007 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372606 5261 Brassicaceae View MSA
123829619 5264 Brassicales-Malvales View MSA
124337787 5266 SBM View MSA
124247414 5268 Malvidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain