Gene : Cagra.0202s0048 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23105:SF31 - RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  48
Name:  ? Cagra.0202s0048 Secondary Identifier:  ? PAC:28919021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0048 0.5kb upstream 0.5kb upstream 2768 true Scaffold202: 165252-168019 Capsella grandiflora
Cagra.0202s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 167520-168019 Capsella grandiflora
Cagra.0202s0048 0.5kb downstream 0.5kb downstream 2768 true Scaffold202: 164752-167519 Capsella grandiflora
Cagra.0202s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 164752-165251 Capsella grandiflora
Cagra.0202s0048 1.0kb upstream 1.0kb upstream 3268 true Scaffold202: 165252-168519 Capsella grandiflora
Cagra.0202s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 167520-168519 Capsella grandiflora
Cagra.0202s0048 1.0kb downstream 1.0kb downstream 3268 true Scaffold202: 164252-167519 Capsella grandiflora
Cagra.0202s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 164252-165251 Capsella grandiflora
Cagra.0202s0048 2.0kb upstream 2.0kb upstream 4268 true Scaffold202: 165252-169519 Capsella grandiflora
Cagra.0202s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 167520-169519 Capsella grandiflora
Cagra.0202s0048 2.0kb downstream 2.0kb downstream 4268 true Scaffold202: 163252-167519 Capsella grandiflora
Cagra.0202s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 163252-165251 Capsella grandiflora
Cagra.0202s0048 5.0kb upstream 5.0kb upstream 7268 true Scaffold202: 165252-172519 Capsella grandiflora
Cagra.0202s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 167520-172519 Capsella grandiflora
Cagra.0202s0048 5.0kb downstream 5.0kb downstream 7268 true Scaffold202: 160252-167519 Capsella grandiflora
Cagra.0202s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 160252-165251 Capsella grandiflora
Cagra.0202s0048 10.0kb upstream 10.0kb upstream 12268 true Scaffold202: 165252-177519 Capsella grandiflora
Cagra.0202s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 167520-177519 Capsella grandiflora
Cagra.0202s0048 10.0kb downstream 10.0kb downstream 12268 true Scaffold202: 155252-167519 Capsella grandiflora
Cagra.0202s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 155252-165251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337678 5261 Brassicaceae View MSA
123778317 5264 Brassicales-Malvales View MSA
124276666 5266 SBM View MSA
124131933 5268 Malvidae View MSA
124067749 5270 Rosid View MSA
123741990 5271 Pentapetalae View MSA
122792570 5272 Eudicot View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain