Gene : Cagra.0205s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33222:SF3 - PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC Genomic Order:  1
Name:  ? Cagra.0205s0001 Secondary Identifier:  ? PAC:28909027
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0205s0001 0.5kb upstream 0.5kb upstream 1514 true Scaffold205: 2439-3952 Capsella grandiflora
Cagra.0205s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold205: 3453-3952 Capsella grandiflora
Cagra.0205s0001 0.5kb downstream 0.5kb downstream 1514 true Scaffold205: 1939-3452 Capsella grandiflora
Cagra.0205s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold205: 1939-2438 Capsella grandiflora
Cagra.0205s0001 1.0kb upstream 1.0kb upstream 2014 true Scaffold205: 2439-4452 Capsella grandiflora
Cagra.0205s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold205: 3453-4452 Capsella grandiflora
Cagra.0205s0001 1.0kb downstream 1.0kb downstream 2014 true Scaffold205: 1439-3452 Capsella grandiflora
Cagra.0205s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold205: 1439-2438 Capsella grandiflora
Cagra.0205s0001 2.0kb upstream 2.0kb upstream 3014 true Scaffold205: 2439-5452 Capsella grandiflora
Cagra.0205s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold205: 3453-5452 Capsella grandiflora
Cagra.0205s0001 2.0kb downstream 2.0kb downstream 3014 true Scaffold205: 439-3452 Capsella grandiflora
Cagra.0205s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold205: 439-2438 Capsella grandiflora
Cagra.0205s0001 5.0kb upstream 5.0kb upstream 6014 true Scaffold205: 2439-8452 Capsella grandiflora
Cagra.0205s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold205: 3453-8452 Capsella grandiflora
Cagra.0205s0001 5.0kb downstream 5.0kb downstream 3452 true Scaffold205: 1-3452 Capsella grandiflora
Cagra.0205s0001 5.0kb downstream 5.0kb downstream 2438 false Scaffold205: 1-2438 Capsella grandiflora
Cagra.0205s0001 10.0kb upstream 10.0kb upstream 11014 true Scaffold205: 2439-13452 Capsella grandiflora
Cagra.0205s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold205: 3453-13452 Capsella grandiflora
Cagra.0205s0001 10.0kb downstream 10.0kb downstream 3452 true Scaffold205: 1-3452 Capsella grandiflora
Cagra.0205s0001 10.0kb downstream 10.0kb downstream 2438 false Scaffold205: 1-2438 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373372 5261 Brassicaceae View MSA
123830781 5264 Brassicales-Malvales View MSA
124339629 5266 SBM View MSA
124241644 5268 Malvidae View MSA
124068427 5270 Rosid View MSA
123747086 5271 Pentapetalae View MSA
122793406 5272 Eudicot View MSA
122042391 5273 Angiosperm View MSA
121347672 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain