Gene : Cagra.0205s0010 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12161:SF14 - REGULATOR OF VPS4 Genomic Order:  10
Name:  ? Cagra.0205s0010 Secondary Identifier:  ? PAC:28909023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0205s0010 0.5kb upstream 0.5kb upstream 2181 true Scaffold205: 25090-27270 Capsella grandiflora
Cagra.0205s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold205: 25090-25589 Capsella grandiflora
Cagra.0205s0010 0.5kb downstream 0.5kb downstream 1867 true Scaffold205: 25590-27456 Capsella grandiflora
Cagra.0205s0010 0.5kb downstream 0.5kb downstream 186 false Scaffold205: 27271-27456 Capsella grandiflora
Cagra.0205s0010 1.0kb upstream 1.0kb upstream 2681 true Scaffold205: 24590-27270 Capsella grandiflora
Cagra.0205s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold205: 24590-25589 Capsella grandiflora
Cagra.0205s0010 1.0kb downstream 1.0kb downstream 1867 true Scaffold205: 25590-27456 Capsella grandiflora
Cagra.0205s0010 1.0kb downstream 1.0kb downstream 186 false Scaffold205: 27271-27456 Capsella grandiflora
Cagra.0205s0010 2.0kb upstream 2.0kb upstream 3681 true Scaffold205: 23590-27270 Capsella grandiflora
Cagra.0205s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold205: 23590-25589 Capsella grandiflora
Cagra.0205s0010 2.0kb downstream 2.0kb downstream 1867 true Scaffold205: 25590-27456 Capsella grandiflora
Cagra.0205s0010 2.0kb downstream 2.0kb downstream 186 false Scaffold205: 27271-27456 Capsella grandiflora
Cagra.0205s0010 5.0kb upstream 5.0kb upstream 6681 true Scaffold205: 20590-27270 Capsella grandiflora
Cagra.0205s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold205: 20590-25589 Capsella grandiflora
Cagra.0205s0010 5.0kb downstream 5.0kb downstream 1867 true Scaffold205: 25590-27456 Capsella grandiflora
Cagra.0205s0010 5.0kb downstream 5.0kb downstream 186 false Scaffold205: 27271-27456 Capsella grandiflora
Cagra.0205s0010 10.0kb upstream 10.0kb upstream 11681 true Scaffold205: 15590-27270 Capsella grandiflora
Cagra.0205s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold205: 15590-25589 Capsella grandiflora
Cagra.0205s0010 10.0kb downstream 10.0kb downstream 1867 true Scaffold205: 25590-27456 Capsella grandiflora
Cagra.0205s0010 10.0kb downstream 10.0kb downstream 186 false Scaffold205: 27271-27456 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375009 5261 Brassicaceae View MSA
123800862 5264 Brassicales-Malvales View MSA
124298225 5266 SBM View MSA
124149920 5268 Malvidae View MSA
124066649 5270 Rosid View MSA
123746994 5271 Pentapetalae View MSA
122787378 5272 Eudicot View MSA
122041860 5273 Angiosperm View MSA
121351542 5274 Embryophyte View MSA
123382216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain