Gene : Cagra.0205s0009 C. grandiflora v1.1
Defline:  (1 of 1) PF00059 - Lectin C-type domain (Lectin_C) Genomic Order:  9
Name:  ? Cagra.0205s0009 Secondary Identifier:  ? PAC:28909029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0205s0009 0.5kb upstream 0.5kb upstream 3110 true Scaffold205: 22213-25322 Capsella grandiflora
Cagra.0205s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold205: 22213-22712 Capsella grandiflora
Cagra.0205s0009 0.5kb downstream 0.5kb downstream 3110 true Scaffold205: 22713-25822 Capsella grandiflora
Cagra.0205s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold205: 25323-25822 Capsella grandiflora
Cagra.0205s0009 1.0kb upstream 1.0kb upstream 3610 true Scaffold205: 21713-25322 Capsella grandiflora
Cagra.0205s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold205: 21713-22712 Capsella grandiflora
Cagra.0205s0009 1.0kb downstream 1.0kb downstream 3610 true Scaffold205: 22713-26322 Capsella grandiflora
Cagra.0205s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold205: 25323-26322 Capsella grandiflora
Cagra.0205s0009 2.0kb upstream 2.0kb upstream 4610 true Scaffold205: 20713-25322 Capsella grandiflora
Cagra.0205s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold205: 20713-22712 Capsella grandiflora
Cagra.0205s0009 2.0kb downstream 2.0kb downstream 4610 true Scaffold205: 22713-27322 Capsella grandiflora
Cagra.0205s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold205: 25323-27322 Capsella grandiflora
Cagra.0205s0009 5.0kb upstream 5.0kb upstream 7610 true Scaffold205: 17713-25322 Capsella grandiflora
Cagra.0205s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold205: 17713-22712 Capsella grandiflora
Cagra.0205s0009 5.0kb downstream 5.0kb downstream 4744 true Scaffold205: 22713-27456 Capsella grandiflora
Cagra.0205s0009 5.0kb downstream 5.0kb downstream 2134 false Scaffold205: 25323-27456 Capsella grandiflora
Cagra.0205s0009 10.0kb upstream 10.0kb upstream 12610 true Scaffold205: 12713-25322 Capsella grandiflora
Cagra.0205s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold205: 12713-22712 Capsella grandiflora
Cagra.0205s0009 10.0kb downstream 10.0kb downstream 4744 true Scaffold205: 22713-27456 Capsella grandiflora
Cagra.0205s0009 10.0kb downstream 10.0kb downstream 2134 false Scaffold205: 25323-27456 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366682 5261 Brassicaceae View MSA
123830553 5264 Brassicales-Malvales View MSA
124336908 5266 SBM View MSA
124237484 5268 Malvidae View MSA
124063336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain